Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3596 ATGGTGAGTCTACCAATTGATTTGGCTAAGACATATCTGAAGGAATTGATAGATGGGGCCATAGCAAGATCACGTTATATATGTTGCTTCACATGCATTACTAAGGAGTTTGAAGAAGAAAAGGTTCGACTGAAAGTAGAAAGAACAACTGTGGGACAACGTGTTAATGTGGCAACTGATAGAGGTGATATTATACAAAACAATGTCCATCATTGGGAGGAGCAAGCTGACGAACTCGATCAAGAGGATACCAAAACAAAGCAAAAATGTTTATTTGGATTCTGTCCTAATTGCAAATGGCGATATAAAAGGGGAAAGGAACTTGCAAATAGGTTGGAGATTATTAAAGAACTGGTCAAAAGAGGGCAAAATCTTGAAATTGGACTCCATGCACGTCTACCAGGCATTGAACGTCATACTTCACAATACTACATTTCTTTTGAAAGCAGAGAGTCAAAATTTAAAGATCTTTTGGAATTCCTGAAGGATGACCAGAATTATATAATAGGATTGCAAGGGATGGGAGGTGTCGGGAAAACTACTTTGGCCAAAGAAGTGGGTAAAGCACTTAAGCGATCCAAACAATTCTCACAAGTCATCGATACGAGAGTGTCATTTTCTCCTAATATAAAAAAGATCCAAGATGATATTTCCGGGCCGTTGGGGTTGGTGTTTGGGGAAAGCTGTAATGAAGCAGACCGACCTAAAAAATTGTGGAATAGATTAACAAATGGTGAGAAAATTCTTCTGATATTAGATGATGTGTGGGGAAATATCGATTTTGATGATATAGGAATTCCGTGTAGTGATAATCACAAAGGCTGCAAAGTTCTCATAACTACACGCAATTTGAGGGTATGCAACATTAATGGATGTGGGAGAACAGTTCAATTGGAACTCTTATCTGAAGAAGATGCATGGATCATGTTCAAAAGATACAATTCTAAAAGCAATGATTTGTCTAAAAATGTACTCACAATAGCAAAAAATATTTCAAATGAATGCAAAGGATTACCAGTAGCAATATCAATTATTGCCAGCAGTTTAAGGGCTCAACAACATCTAGTAGAGTGGGAGGAGGCCTTAAAGTCATTGCAGAAGCCTATGTTTGGGCATGGTGTTGATGATAATTTGGTTGACATTTATAAATGCCTGAGGTTTAGCTATGATAATATGAAGGATGAAAATGCCAAGAGATTGTTCCTCTTATGTTCCGTGTTCCAAGAAGATGGAGAAATTTCTATTGAAGTGCTAACCAGGTTTGCCATTGGTGTAGGCATTTTGGGGGAAGGTTATGATAGTTACGAAGATGCTCGAAGGCAAGTAGAGTTAGCAAAAAATAAGCTCCTAGATTCTTGTTTGTTGTTGGAAACCAATGAAAGGAGTATTGTGAAAATGCATGACTTGGTGCGTGAAGTGGCCCAATGGATATCAAATAAAGAGATTCAAGCTATAGATCTGTCAAACAAAAATCAAAAGTCATTGATTGAAAGAGAGAACGATATCAAATATTTGTTATGTGAAAGCAAGCTAATTGATGTGTTCTCGTGTACGTTTGATGGTTCTAAACTTGAGATTCTAATTGTCGACATGGATACTAGTGACTCAGTGGACATACCAAGTTCATTCTTTGAAAATATTGCAGATCTTCGTGTTTTGCATTTATCATATCAAGATCAGCCTACTATACCATTACTGCGGCCAATTCAGTCATTGAGAAACATTCGATCTTTATTATTTGGTAGGGTTGATTTAGGTGATATCTCTATTTTGGGAAAGCTCCAAACTCTTGAGACTCTTGATTTGGTATGGTGTAAAATTGATAAATTGCCACCTGAAATTGCAAAACTAGAGAAACTTAAATTGTTGAACTTGGTATTCTGTGAAGTTCGAAGTGAAAATCCATTTGAAGTTATCAAAAGTTGCTCATCACTTGAAGAGTTGTATTTTCTTCATAGTTTTAATGATTCTTGTCGAGTTACCTTACCTGCATTGAAAAAGTATCATGTTTGTAAGTCATGGGCTATAATAAATGATTCACTATCAAAATGTGTGGCTTTTGAAGGGGATGGGGATGCGGAACTTTTCTTGGAAGCAACATTTAAATACTTGATGCAAACAGCAGAGGTCCTTCAGCTAAGTCGAATTGAGGGGAAATGGAGAAATCTCATACCTGAAATCGTTTCAATTGATCGAGGTATGAATGATCTAGTTGAGTTTCGCTTGCGTTATGATTCGCAACTGCAATGCCTCATTGACACTAAGGATATTGGTTCTCAACTACCAAATGTTTTCTCTAAGTTGGTTGTGCTACATCTTTATGAAATTAACAATTTGGAAGTACTATGCAATGGTCCTCTTTCCTCTGACTCTCTAAAGAATTTGGAAGAGCTATCCGTTGAATGTTGTGAAGAATTGAAAAGCTTGTTTAACTTCAAGGTAAACCTTTGCAATTTGAAGACCATGACATTGGAGGCATGTCCAATGTTGGTTTCCCTATTTCAATCATCAACTTCTCTAAGCCTATTGGAGGAATTGAAAATAATTGATTGTGAGAAACTGAAAAACATTATATCATGTGACAATGATATTATGAGTCACAACTCAATGTTTCCAAATTTAAAAGTTGTTGATATTGAAAGATGCCCCCTATTGAAAGAACCGCAGCTCCATGACTCGCCAAATTTCAGTAGTCATCGTGCTATGTCTTTGTCCGTGAAAGAGTCATTTTCCAAAGATGATCCCAAGGCACAAATGGAATTGGATCCTGTAAAATGCAACTGCTTCTCTTGGACTTGTATATTTTGTTGTAGTCATAAACTGAAGAGTACAAGTACAGAAATTCCAGTAGTCTCCGATGATCAACAAGGCTGCTCAATCACATTGAGTATGAAAGAAACACAGGGCCACCATATTTCAGAAAGTTCTACATCAAGAAACACTATAACAACAATTTTGTCCAATAATTCACAAACAAGGATCGAGCCACACATATCATTAGTTGCTCCCAGACAAAAGCGTTTGAATGAAATAGACGACCAAAACATTCAAGAGGGTTCTACTTCCATGTCAGAAAAAATTGTAGCATCAAATTCGTCTATCGCTTCAGAAACAACAAATAATGAGCCACCTATACAAGGTATTGAGATAAGTGTTGAAGAAGGAACTACATCAGCTAGTAATGCTAAGGCAATAACATCATCAACTCATTTAGAATTAGATTTGTTGAATGAACAATCGACGAGGCAACAATGTTTAGTCAAACCTTTTCCGGAAAAAAATTGTTTGAAAGCAACAGAAGATCAAAGTATTCAAGAAGGTTCTATATCACAAAAACCTGTTGCAACAACTTTGCTTGCCATTTCAGAAACAACAGTACCTATACAATTTGTTGCTCCTAAACAAAAGAGTATCATGGCAAATGTGGAAGAAGGAACTAAATTAGCTAAGACAATAACATCCTCAACTCTTTCAGAATCAGTTAGTTCATCATCAGTAAAACTTGCTATGCAGAGTATCATGGAACAAGATGTTGATGCCAAAGACTCTCAAGAAACAACTAAGATTAATAATGATCAAGTTTCTCTTAATGATGCTGTAGTCATGAATGTAAGCTCAATTATTGAAGAACAGTTTCCTAAGGATGGTGAATTTATAGTTCCAGAATCTAGGCCATCTCCTAGCAACAGCATTCCTTTGCCTCATACATATCAGACTCCTTCAATGCCTCCTGAAGGAAACCCTTCTCAAATTGTGGAAGATTCAAGTTCTTCTTCTCTTGTCATGCGAGAGCTTGAGCAATTGGTCTCCAAGAAGCATTTGAATTATGAGAACTTGTCTTTGTTGATTGATTTCCTTGTTAAGCATCCTCAAGTTCTTTTAAGGGACACTTCACTGAGTAATAGATACAAAAGTTATGCCTACAACTGCCTAGCCGAGCTATTGAAATTCCTCCAAACGCATAGTGTGTTGGATGTGTTAGGTTCAAGCCGCTCTGAATTTGATGAGTTATTACAAGATGTGCACAAATGCGGTTTTGATAAGGATTGGTTGGATGGTGTTGAAAAACGCGCTTTGTCTCCTGATTTACCATTCTCTCAAGATGCATTGCAAAAAGTGTTGGATCCCCAGCAACAGGTCACCAAGGAAGTTGAGGCGATGCTTTTGAAGATAAACATTTTTACTCAACATGTGGAAGAGCTTAAACATCAATTAACATCCTCCAAAGCTGCTTTGGACAGTATCATTCAACACGAGGCACAAATTTTAGAAATTAAGGCCGCTTTAAGCGCACCTCTTGGCTATTAG 4308 0.3702 MVSLPIDLAKTYLKELIDGAIARSRYICCFTCITKEFEEEKVRLKVERTTVGQRVNVATDRGDIIQNNVHHWEEQADELDQEDTKTKQKCLFGFCPNCKWRYKRGKELANRLEIIKELVKRGQNLEIGLHARLPGIERHTSQYYISFESRESKFKDLLEFLKDDQNYIIGLQGMGGVGKTTLAKEVGKALKRSKQFSQVIDTRVSFSPNIKKIQDDISGPLGLVFGESCNEADRPKKLWNRLTNGEKILLILDDVWGNIDFDDIGIPCSDNHKGCKVLITTRNLRVCNINGCGRTVQLELLSEEDAWIMFKRYNSKSNDLSKNVLTIAKNISNECKGLPVAISIIASSLRAQQHLVEWEEALKSLQKPMFGHGVDDNLVDIYKCLRFSYDNMKDENAKRLFLLCSVFQEDGEISIEVLTRFAIGVGILGEGYDSYEDARRQVELAKNKLLDSCLLLETNERSIVKMHDLVREVAQWISNKEIQAIDLSNKNQKSLIERENDIKYLLCESKLIDVFSCTFDGSKLEILIVDMDTSDSVDIPSSFFENIADLRVLHLSYQDQPTIPLLRPIQSLRNIRSLLFGRVDLGDISILGKLQTLETLDLVWCKIDKLPPEIAKLEKLKLLNLVFCEVRSENPFEVIKSCSSLEELYFLHSFNDSCRVTLPALKKYHVCKSWAIINDSLSKCVAFEGDGDAELFLEATFKYLMQTAEVLQLSRIEGKWRNLIPEIVSIDRGMNDLVEFRLRYDSQLQCLIDTKDIGSQLPNVFSKLVVLHLYEINNLEVLCNGPLSSDSLKNLEELSVECCEELKSLFNFKVNLCNLKTMTLEACPMLVSLFQSSTSLSLLEELKIIDCEKLKNIISCDNDIMSHNSMFPNLKVVDIERCPLLKEPQLHDSPNFSSHRAMSLSVKESFSKDDPKAQMELDPVKCNCFSWTCIFCCSHKLKSTSTEIPVVSDDQQGCSITLSMKETQGHHISESSTSRNTITTILSNNSQTRIEPHISLVAPRQKRLNEIDDQNIQEGSTSMSEKIVASNSSIASETTNNEPPIQGIEISVEEGTTSASNAKAITSSTHLELDLLNEQSTRQQCLVKPFPEKNCLKATEDQSIQEGSISQKPVATTLLAISETTVPIQFVAPKQKSIMANVEEGTKLAKTITSSTLSESVSSSSVKLAMQSIMEQDVDAKDSQETTKINNDQVSLNDAVVMNVSSIIEEQFPKDGEFIVPESRPSPSNSIPLPHTYQTPSMPPEGNPSQIVEDSSSSSLVMRELEQLVSKKHLNYENLSLLIDFLVKHPQVLLRDTSLSNRYKSYAYNCLAELLKFLQTHSVLDVLGSSRSEFDELLQDVHKCGFDKDWLDGVEKRALSPDLPFSQDALQKVLDPQQQVTKEVEAMLLKINIFTQHVEELKHQLTSSKAALDSIIQHEAQILEIKAALSAPLGY* 1436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3596 1435 Gene3D Ribonuclease Inhibitor 520 671 IPR032675 -
Tpr3g3596 1435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 404 IPR027417 -
Tpr3g3596 1435 SUPERFAMILY L domain-like 465 899 - -
Tpr3g3596 1435 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 100 892 - -
Tpr3g3596 1435 Pfam NB-ARC domain 156 391 IPR002182 GO:0043531
Tpr3g3596 1435 Gene3D - 389 476 IPR036388 -
Tpr3g3596 1435 PRINTS Disease resistance protein signature 168 183 - -
Tpr3g3596 1435 PRINTS Disease resistance protein signature 242 256 - -
Tpr3g3596 1435 PRINTS Disease resistance protein signature 335 349 - -
Tpr3g3596 1435 PRINTS Disease resistance protein signature 814 830 - -
Tpr3g3596 1435 Gene3D - 134 293 IPR027417 -
Tpr3g3596 1435 Gene3D - 300 388 IPR042197 -
Tpr3g3596 1435 PANTHER - 100 892 - -
Tpr3g3596 1435 Gene3D Ribonuclease Inhibitor 704 908 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3596 Tpr-Chr3 39833232 39841748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3596 169 563 WRKY Transcription Factor Family AT5G45050 24.700 3.84e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3596 - - mtr:MTR_3g467340 1345.1