Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g3593 | ATGGGTTCTGACATTGGTATCGTGAATGGTTCGTGTGTTCATGAATGGAAGAGAGGTTGGCCTCTACGATCTGGTGGATTTGCTCAACTTTGCTTCAAGTGCGGATTTGTGGAGGAATGGAAGTGTGACATCATTGACTCATTATCTGCTTATGAGAATTCAGTTTTCTGTAATAAATTCCACCGTCAACAAACTGGTTGGCGAGAATGTAACTTTTGCAAGAAGCCTATTCACTGTGGATGCATAGTATCTAGATCTCTGTTCGAGTATCTTGACTTCGGTGGTATAGGTTGTGTTAGCTGTGTAAAAACTTCCCAACATAATATGATTCGTAATACTGAAAATCCTAAATGGCCTGTTTCATTGACCCAGAATAATGCAAGGGATATGAGTTCTGCTCATTTTGATGGCAGACTGTTTGCGAGTAATGTTGATGAAGGAAAGCTTATGCAATTATGCAGAGTCGTTGAAGCTAGTGAATCCATCCATATGAATCATGCTCCGAGAGACAACATTATTACATCCAACGGGAAAAACAATCAAGAAGTTAAGCCTTCATTCAGGGAAGGGGATACTGGTTTTTCAAATGTGATTAAACCGTCTATTCAATCATTAACTTTTTCTACATTAGAAAATAATAGACCAACATGGGAGATGAAAAACATGCACGAATCAAATGCAAAGCCGTCTTTGAATATGTGTTTGGGAAATCCGTCAGGGAACAACTCTTTCCCTCTTTCTGCTGGAGAGAATATAGAAGGAAGACTTGAAGGAAAAGTTTCTCCTCCCTTTCATCAAGGGCCGAGATCTCGCCCTATACTGCCCAAACTATTGAAGACTGGCCTTACCATGAATGGAGAAACTGAAAAAGGGTCAACTTCTCAACCACGTATTGCCCGGCCTCCTGGTGATGGGAGGGGCAAGAATCAGTTACTTCCTAGATATTGGCCTAGGATTACAGATCAGGAGCTGGAGCGTTTGTCTGGAGATTTGAAATCCACTGTAGTTCCATTGTTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAAGCCTGTGCCGAGGCTTATTTTCCTCATATTTCACATTCTGAAGGCCTTCCTTTGCGGGTCCAAGATGTAAAGGGGAATGAATGGACTTTTCAGTTCAGATTTTGGCCTAATAACAACAGCAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGGCCATGGAGTTACGTGCTGGTGATACCGTTACATTTAGTCGGATAGATCCTGGGGGAAAACTTGTTATTGGTTTCCGAAAGTCATCAAATTCCACAGATATGCAGGATGCTTCTCCATCTTCACATTCTAATGGCCTTTCTGCAAAGGGAGCCACCTTTTCTGGTGGAGCTGATAATCTTCCATCGAGAAGTAATTGTGGTGATTTTCTCCGTTCACCAAAAGGGAACGGGGAACTTCTCTTAAATGGACATCCGGAATCTCCGCATTTGGGTACAGGAGCTGCTGGTTTGCTAAAAACTGAAAATTGCGAGATGACAAACAATAATTCACTGGATCAAAAAATTTCAGCTTTAGAGAAGAAGAGGACTCGGAATATTGGACTTAAAAGTAAGAGATTGCTTATTGGTAATGACGATGCTATGGAGTTGAGACTTACATGGGAAGAAGCGCAGGACTTGCTTCGTCCACCGCCTAGTGTCAAGCCAAGCATTGTCACAATTGAAGACCAAGTATTTGAAGAATATGATGAGCCCCCGGTTTTTGGAAAGAGAACAATATTCAGCGCCTCTTCATCTGGGATGAAGGAACAATGGGCTCAATGTGATGATTGTTCTAAATGGAGAAAGTTGCCGGTTGATGTTCTTCTTCCTCCCAAGTGGACATGTTCTGAAAATGTTTGGGATACAAGCAGATCTTCATGTTCTGCACCAGAGGAGCTGAGCTCAAGAGAATTAGAAAATCTTATGAAAACCAGCAAAGATTTTAAGAAGCGACGGATTGTAGAAAACAGCAAGTTGATCCAAGAACACGAGCCTTCTGGCTTAGATGCTCTCGCCAGTTTAGCAGTCTTAGGAGAAAATCTCATTGACCCTACTGATTCCTCAGCCGGAGCCACCACTAAACATCCTAGACATCGCCCAGGCTGCTCTTGTATTGTGTGCATTCAGCCCCCAAGTGGAAAAGGAAGACACAAGCCAACATGTACTTGCAACGTGTGCACGACCGTGAAGCGTCGGTTCAAAACTCTTATGCTCCGCAAGAAGAAACGCCAGTCAGAGCGGGAAGCAGATGCCGCTGCCAAGAAAGATCAAATTCGCAAAAAAGACGATGACTTAAATACCAATGGTGGAGCATCAAGAGATGATGCAAATCCTTTGGAAAAAGAGGGAGGTTTAAATAGAAGTCAAACCGAGGTTGGTGAGTCCAGTGCTGGAAAGATAGATCTGAATAGTGATCCAAACCGCGAAGACTCACAATTGGATAATATCGCAAAACTTCGTCGTGAACTATCGGAACGTATGAATATGAACCAAAATGTTGGTCTAAGAACCATTAATACTGAAGTGCAGGAAGGTCAGCAGCATTCTTCTTTGGTCACTCAATCTAATGGTGAAGATAAGAGACACTTGTCCGATGATAGAAGCATTGCATCCATTATCTTAAACAAAGAAAGAAGAGATGAAGTATACAATCAATCAAATGAAAGTCAAAACAATATGTCTTAA | 2739 | 0.4235 | MGSDIGIVNGSCVHEWKRGWPLRSGGFAQLCFKCGFVEEWKCDIIDSLSAYENSVFCNKFHRQQTGWRECNFCKKPIHCGCIVSRSLFEYLDFGGIGCVSCVKTSQHNMIRNTENPKWPVSLTQNNARDMSSAHFDGRLFASNVDEGKLMQLCRVVEASESIHMNHAPRDNIITSNGKNNQEVKPSFREGDTGFSNVIKPSIQSLTFSTLENNRPTWEMKNMHESNAKPSLNMCLGNPSGNNSFPLSAGENIEGRLEGKVSPPFHQGPRSRPILPKLLKTGLTMNGETEKGSTSQPRIARPPGDGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPHISHSEGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMELRAGDTVTFSRIDPGGKLVIGFRKSSNSTDMQDASPSSHSNGLSAKGATFSGGADNLPSRSNCGDFLRSPKGNGELLLNGHPESPHLGTGAAGLLKTENCEMTNNNSLDQKISALEKKRTRNIGLKSKRLLIGNDDAMELRLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPVFGKRTIFSASSSGMKEQWAQCDDCSKWRKLPVDVLLPPKWTCSENVWDTSRSSCSAPEELSSRELENLMKTSKDFKKRRIVENSKLIQEHEPSGLDALASLAVLGENLIDPTDSSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCTTVKRRFKTLMLRKKKRQSEREADAAAKKDQIRKKDDDLNTNGGASRDDANPLEKEGGLNRSQTEVGESSAGKIDLNSDPNREDSQLDNIAKLRRELSERMNMNQNVGLRTINTEVQEGQQHSSLVTQSNGEDKRHLSDDRSIASIILNKERRDEVYNQSNESQNNMS* | 913 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g3593 | 912 | ProSiteProfiles | Zinc finger CW-type profile. | 603 | 653 | IPR011124 | GO:0008270 | |
Tpr3g3593 | 912 | MobiDBLite | consensus disorder prediction | 759 | 799 | - | - | |
Tpr3g3593 | 912 | SMART | B3_2 | 339 | 440 | IPR003340 | GO:0003677 | |
Tpr3g3593 | 912 | MobiDBLite | consensus disorder prediction | 876 | 902 | - | - | |
Tpr3g3593 | 912 | Gene3D | - | 598 | 652 | - | - | |
Tpr3g3593 | 912 | MobiDBLite | consensus disorder prediction | 285 | 310 | - | - | |
Tpr3g3593 | 912 | Gene3D | - | 317 | 444 | IPR015300 | - | |
Tpr3g3593 | 912 | ProSiteProfiles | B3 DNA-binding domain profile. | 339 | 440 | IPR003340 | GO:0003677 | |
Tpr3g3593 | 912 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 7 | 859 | - | - | |
Tpr3g3593 | 912 | Pfam | CW-type Zinc Finger | 608 | 650 | IPR011124 | GO:0008270 | |
Tpr3g3593 | 912 | MobiDBLite | consensus disorder prediction | 860 | 875 | - | - | |
Tpr3g3593 | 912 | CDD | B3_DNA | 337 | 438 | IPR003340 | GO:0003677 | |
Tpr3g3593 | 912 | MobiDBLite | consensus disorder prediction | 860 | 912 | - | - | |
Tpr3g3593 | 912 | Pfam | B3 DNA binding domain | 339 | 439 | IPR003340 | GO:0003677 | |
Tpr3g3593 | 912 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 | 7 | 859 | - | - | |
Tpr3g3593 | 912 | SUPERFAMILY | DNA-binding pseudobarrel domain | 337 | 441 | IPR015300 | - | |
Tpr3g3593 | 912 | MobiDBLite | consensus disorder prediction | 806 | 820 | - | - | |
Tpr3g3593 | 912 | MobiDBLite | consensus disorder prediction | 755 | 831 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g3593 | Tpr-Chr3 | 39808647 | 39815766 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g3593 | 1 | 836 | B3 DNA Binding Superfamily | AT2G30470 | 48.694 | 0.0 | 694 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Tpr3g3593 | B3 | 1.2e-16 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g3593 | - | - | gmx:100789848 | 1389.79 |