Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3593 ATGGGTTCTGACATTGGTATCGTGAATGGTTCGTGTGTTCATGAATGGAAGAGAGGTTGGCCTCTACGATCTGGTGGATTTGCTCAACTTTGCTTCAAGTGCGGATTTGTGGAGGAATGGAAGTGTGACATCATTGACTCATTATCTGCTTATGAGAATTCAGTTTTCTGTAATAAATTCCACCGTCAACAAACTGGTTGGCGAGAATGTAACTTTTGCAAGAAGCCTATTCACTGTGGATGCATAGTATCTAGATCTCTGTTCGAGTATCTTGACTTCGGTGGTATAGGTTGTGTTAGCTGTGTAAAAACTTCCCAACATAATATGATTCGTAATACTGAAAATCCTAAATGGCCTGTTTCATTGACCCAGAATAATGCAAGGGATATGAGTTCTGCTCATTTTGATGGCAGACTGTTTGCGAGTAATGTTGATGAAGGAAAGCTTATGCAATTATGCAGAGTCGTTGAAGCTAGTGAATCCATCCATATGAATCATGCTCCGAGAGACAACATTATTACATCCAACGGGAAAAACAATCAAGAAGTTAAGCCTTCATTCAGGGAAGGGGATACTGGTTTTTCAAATGTGATTAAACCGTCTATTCAATCATTAACTTTTTCTACATTAGAAAATAATAGACCAACATGGGAGATGAAAAACATGCACGAATCAAATGCAAAGCCGTCTTTGAATATGTGTTTGGGAAATCCGTCAGGGAACAACTCTTTCCCTCTTTCTGCTGGAGAGAATATAGAAGGAAGACTTGAAGGAAAAGTTTCTCCTCCCTTTCATCAAGGGCCGAGATCTCGCCCTATACTGCCCAAACTATTGAAGACTGGCCTTACCATGAATGGAGAAACTGAAAAAGGGTCAACTTCTCAACCACGTATTGCCCGGCCTCCTGGTGATGGGAGGGGCAAGAATCAGTTACTTCCTAGATATTGGCCTAGGATTACAGATCAGGAGCTGGAGCGTTTGTCTGGAGATTTGAAATCCACTGTAGTTCCATTGTTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAAGCCTGTGCCGAGGCTTATTTTCCTCATATTTCACATTCTGAAGGCCTTCCTTTGCGGGTCCAAGATGTAAAGGGGAATGAATGGACTTTTCAGTTCAGATTTTGGCCTAATAACAACAGCAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGGCCATGGAGTTACGTGCTGGTGATACCGTTACATTTAGTCGGATAGATCCTGGGGGAAAACTTGTTATTGGTTTCCGAAAGTCATCAAATTCCACAGATATGCAGGATGCTTCTCCATCTTCACATTCTAATGGCCTTTCTGCAAAGGGAGCCACCTTTTCTGGTGGAGCTGATAATCTTCCATCGAGAAGTAATTGTGGTGATTTTCTCCGTTCACCAAAAGGGAACGGGGAACTTCTCTTAAATGGACATCCGGAATCTCCGCATTTGGGTACAGGAGCTGCTGGTTTGCTAAAAACTGAAAATTGCGAGATGACAAACAATAATTCACTGGATCAAAAAATTTCAGCTTTAGAGAAGAAGAGGACTCGGAATATTGGACTTAAAAGTAAGAGATTGCTTATTGGTAATGACGATGCTATGGAGTTGAGACTTACATGGGAAGAAGCGCAGGACTTGCTTCGTCCACCGCCTAGTGTCAAGCCAAGCATTGTCACAATTGAAGACCAAGTATTTGAAGAATATGATGAGCCCCCGGTTTTTGGAAAGAGAACAATATTCAGCGCCTCTTCATCTGGGATGAAGGAACAATGGGCTCAATGTGATGATTGTTCTAAATGGAGAAAGTTGCCGGTTGATGTTCTTCTTCCTCCCAAGTGGACATGTTCTGAAAATGTTTGGGATACAAGCAGATCTTCATGTTCTGCACCAGAGGAGCTGAGCTCAAGAGAATTAGAAAATCTTATGAAAACCAGCAAAGATTTTAAGAAGCGACGGATTGTAGAAAACAGCAAGTTGATCCAAGAACACGAGCCTTCTGGCTTAGATGCTCTCGCCAGTTTAGCAGTCTTAGGAGAAAATCTCATTGACCCTACTGATTCCTCAGCCGGAGCCACCACTAAACATCCTAGACATCGCCCAGGCTGCTCTTGTATTGTGTGCATTCAGCCCCCAAGTGGAAAAGGAAGACACAAGCCAACATGTACTTGCAACGTGTGCACGACCGTGAAGCGTCGGTTCAAAACTCTTATGCTCCGCAAGAAGAAACGCCAGTCAGAGCGGGAAGCAGATGCCGCTGCCAAGAAAGATCAAATTCGCAAAAAAGACGATGACTTAAATACCAATGGTGGAGCATCAAGAGATGATGCAAATCCTTTGGAAAAAGAGGGAGGTTTAAATAGAAGTCAAACCGAGGTTGGTGAGTCCAGTGCTGGAAAGATAGATCTGAATAGTGATCCAAACCGCGAAGACTCACAATTGGATAATATCGCAAAACTTCGTCGTGAACTATCGGAACGTATGAATATGAACCAAAATGTTGGTCTAAGAACCATTAATACTGAAGTGCAGGAAGGTCAGCAGCATTCTTCTTTGGTCACTCAATCTAATGGTGAAGATAAGAGACACTTGTCCGATGATAGAAGCATTGCATCCATTATCTTAAACAAAGAAAGAAGAGATGAAGTATACAATCAATCAAATGAAAGTCAAAACAATATGTCTTAA 2739 0.4235 MGSDIGIVNGSCVHEWKRGWPLRSGGFAQLCFKCGFVEEWKCDIIDSLSAYENSVFCNKFHRQQTGWRECNFCKKPIHCGCIVSRSLFEYLDFGGIGCVSCVKTSQHNMIRNTENPKWPVSLTQNNARDMSSAHFDGRLFASNVDEGKLMQLCRVVEASESIHMNHAPRDNIITSNGKNNQEVKPSFREGDTGFSNVIKPSIQSLTFSTLENNRPTWEMKNMHESNAKPSLNMCLGNPSGNNSFPLSAGENIEGRLEGKVSPPFHQGPRSRPILPKLLKTGLTMNGETEKGSTSQPRIARPPGDGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPHISHSEGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMELRAGDTVTFSRIDPGGKLVIGFRKSSNSTDMQDASPSSHSNGLSAKGATFSGGADNLPSRSNCGDFLRSPKGNGELLLNGHPESPHLGTGAAGLLKTENCEMTNNNSLDQKISALEKKRTRNIGLKSKRLLIGNDDAMELRLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPVFGKRTIFSASSSGMKEQWAQCDDCSKWRKLPVDVLLPPKWTCSENVWDTSRSSCSAPEELSSRELENLMKTSKDFKKRRIVENSKLIQEHEPSGLDALASLAVLGENLIDPTDSSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCTTVKRRFKTLMLRKKKRQSEREADAAAKKDQIRKKDDDLNTNGGASRDDANPLEKEGGLNRSQTEVGESSAGKIDLNSDPNREDSQLDNIAKLRRELSERMNMNQNVGLRTINTEVQEGQQHSSLVTQSNGEDKRHLSDDRSIASIILNKERRDEVYNQSNESQNNMS* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3593 912 ProSiteProfiles Zinc finger CW-type profile. 603 653 IPR011124 GO:0008270
Tpr3g3593 912 MobiDBLite consensus disorder prediction 759 799 - -
Tpr3g3593 912 SMART B3_2 339 440 IPR003340 GO:0003677
Tpr3g3593 912 MobiDBLite consensus disorder prediction 876 902 - -
Tpr3g3593 912 Gene3D - 598 652 - -
Tpr3g3593 912 MobiDBLite consensus disorder prediction 285 310 - -
Tpr3g3593 912 Gene3D - 317 444 IPR015300 -
Tpr3g3593 912 ProSiteProfiles B3 DNA-binding domain profile. 339 440 IPR003340 GO:0003677
Tpr3g3593 912 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 7 859 - -
Tpr3g3593 912 Pfam CW-type Zinc Finger 608 650 IPR011124 GO:0008270
Tpr3g3593 912 MobiDBLite consensus disorder prediction 860 875 - -
Tpr3g3593 912 CDD B3_DNA 337 438 IPR003340 GO:0003677
Tpr3g3593 912 MobiDBLite consensus disorder prediction 860 912 - -
Tpr3g3593 912 Pfam B3 DNA binding domain 339 439 IPR003340 GO:0003677
Tpr3g3593 912 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 7 859 - -
Tpr3g3593 912 SUPERFAMILY DNA-binding pseudobarrel domain 337 441 IPR015300 -
Tpr3g3593 912 MobiDBLite consensus disorder prediction 806 820 - -
Tpr3g3593 912 MobiDBLite consensus disorder prediction 755 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3593 Tpr-Chr3 39808647 39815766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3593 1 836 B3 DNA Binding Superfamily AT2G30470 48.694 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr3g3593 B3 1.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3593 - - gmx:100789848 1389.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3593 3 39808647 39815766 Tpr3g3593 3 39808647 39815766 ECH
Tpr3g3593 3 39808647 39815766 Tpr4g2963 4 33867345 33873831 PCT