Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3590 ATGGAAGAGAACAACGTTGTTTTGTTGGATTTCTGGCCAAGCTCATATGGAATGAGAGTGAAAATCGCGTTGGAAGAGAAGCGAGTTTCATATGAATGTAGACAAGAAGATTTTCAAGCTAAAAGCTCTCTCCTTTTAGAGATGAACCCGGTTTACAAAACGATTCCGGTTTTGGTTCATAATGGAAAATCCATATGTGAATCACTCAACATTGTTGAGTACATTGATGAAGCTTGGAACCACAAACCTTCTCTTTTGCCCTCTGACCCTTACAAACGATCCATAGCCAAATTTTGGGGAGATTACATTGACAAACATGTATACAGCATTGGAAAGAAGGTGTGGACAGGAAAGGGTGAAGAACAAGAAGAGGGTAAAAAGAAGTTTATAGAATGCTTGAAGACACTAGAACAAGAGCTTGGAGACAAGCCATATTTTGGTGGAGAGGACTTTGGATATGTTGATGTGGCTCTTATTCCCTTCACAAGTTGGTTTTACACCTATGAAACATATGGGAAACTAAGTATAGAGGATGAGTGTCCTAAGCTTGTGAGTTGGGTGAAGAGGTGTATGGAAAAGGAGAGTGTGGCGAAGTCACTTCCTCACCCTCACAAAATCTATGGTTTTGCAATGCAATATAAACAAAATCATGGGCTTGAATAG 663 0.3982 MEENNVVLLDFWPSSYGMRVKIALEEKRVSYECRQEDFQAKSSLLLEMNPVYKTIPVLVHNGKSICESLNIVEYIDEAWNHKPSLLPSDPYKRSIAKFWGDYIDKHVYSIGKKVWTGKGEEQEEGKKKFIECLKTLEQELGDKPYFGGEDFGYVDVALIPFTSWFYTYETYGKLSIEDECPKLVSWVKRCMEKESVAKSLPHPHKIYGFAMQYKQNHGLE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3590 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Tpr3g3590 220 Gene3D Glutaredoxin 2 88 - -
Tpr3g3590 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 216 IPR045073 -
Tpr3g3590 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 216 - -
Tpr3g3590 220 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Tpr3g3590 220 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Tpr3g3590 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Tpr3g3590 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Tpr3g3590 220 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Tpr3g3590 220 CDD GST_N_Tau 6 79 - -
Tpr3g3590 220 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Tpr3g3590 220 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Tpr3g3590 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Tpr3g3590 220 Gene3D - 89 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3590 Tpr-Chr3 39776517 39778067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3590 4 220 Glutathione S-transferase Gene Family AT1G17180 62.212 6.42e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3590 K00799 - gmx:100527221 379.022