Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3589 ATGTGTGATCCTTGTGCAAGTGTCTTTTCCTGTGCTCGTGAAAACTTGCTTCCACTAGCCCGTAAACATTTGTTTCCACTAGCCCTTGATCATTTGCTTCCAATCCTAAAGGAAGGAGTCAACATGATTAGGGGTATCCCAAATGACGAAATTGCACAAATGAAACATGAACTTGAAACCATCGAAGAATTCATCCATCAGGCAGATAAAATGGCTGATGCCGAAGGAGACCATCCAAGTGATGATGGAATTGGAACTAGAGAAAAGATCAAGCAGCTGATAGAAGCATCTTTTCGCATACAAGATATCATTGATGAATATATAATCCGCGAGGAGCAACAATTTCCAGATCCTGGATGTGCTGCTGGTGCTTCTGACTATGTCAAAACTAAGTTTCTCCGTCTCCAAATAGCCCATGATATTCATAGCATTAAATCCCAAATTAATGAAATGAAAGAAACATGTTTTGAAACGGATCATGAAGGATCAAGCAGTTTTGTTTCAAACCTGAATGATGCAACATCATTGCAGAACCTTCGAGATGATCCTTTTTACTTAGATGAAGCTGATGTTGTTGGCTTTGAAAAGCCAAGAGGCATATTGATTGATTACATGGTGAAGGGAAGAAAAGAGCTCACAGCCGTCTCCGTGGTAGCAATGGGAGGGCAAGGAAAAACCACTCTTGCTAAAAAAGTTTTTGACAGCAAAGAAGTCATGGGACACTTTGAATTTCGTGTATGGATCACGGTGTCACAATCATATGATATAGAAGAGTTGCTGAGATACATGTTAAAGGAGCTTTGCAAACAACAAAATGTCCATCCTGAGATCATTCATGAAATGAAAATTCATGAAATGAATCGACGACCATTAGTTGAAAAGGTGAGAAACTACTTGCAGCAAAAAAGGTACGTTGTCGTGTTTGACGATGTATGGAGCTTAAATTTTTGGGGTGATATTAAACTTGCTATGATTGATAACAAAAAGGGTTGTAGGATACTAATCACCACTAGGACCATGGATGTTGCCACTTCTTGTAGGGAATCTTGTTTTGTTGAAATTCTTGAACTCAAAGGTTTAAATGATGAACACTCTTTGAAATTGTTCAATAAGAAGGCATTTCATGACTTGATCGGACGTTGTCCGGAAAATCTTGTTGCTATATCGTCTAAAATTGTTAAAAAATGTGATGGATTACCACTAGCAATTGTAGTCACTGGTGGTCTTTTATCATGCAAAAATAGATCATATGTTGACTGGTACAAGTTTAGTGAAAATATGAATTTAGAGTTAAACAAAGATTCCAAGATAAACAAATTGTTAGCTCTTAGTTACCATGATTTGCCTTACAACATCAAGTCATGTTTCTTGTATTTTGGATTATATCCAGAAGACTGTATAGTTCCTTCAAAGATGTTGACTCTACAATGGATAGCTGAAGGGTTCGTGAAAGAAGATAGAGGAAGGACGTTGGAAGAGGTTGCTGAAGGATATTTAACAATGTTGATCCATAGAAGTTTGGTGCAAGTAGTTTCAATCACTATTGATGGAAGAGCAAAAAGTTGTCGTGTTCATGATCTAGTGCATGCAATGATCCTTAAAAAATGTGAGGATTTAAGTTTTTGCAAGAATATTAGTGAGGACAAACAATCATCTTTGACTGGAATGGCTCGGCGCCTATCGATAGCAGACAGTTCTGATAATTTAATGGAAAGTATTGAAAACTCACAGGTTCGATCACTGATTGTTTACAAACCAAAAAAAATATCTCTATCCTTTGTAAGGAGAATCCCTACAAAATACAGGCGGTTGAAGATGCTTAATATAGATGATGATCGATTGCATGATGTTCCTGAAGACTTGCAATGTTTGAGCCACTTGAAGTATTTTAGATTCAGAAATGGAAGGGGTAATGACATGTATTTTCCACTTCCAGAATCCATTGGCATGATGGGGAACTTAGAGACCTTGGATTTAGCAGATACATATTACTATGAACCTATGCCGAAGGAGATTTGCATGCTTAGAAAGCTACGCCATTTTATAGGCGACCAACTGGATTTAATTCCATTGAAGGATGGTATTGGAGGTATGACATCGCTACAAACGCTGCCTAAAGTTTATTTTAGCCCGTTTAGAGCTGAAAGGGATAACGAAGTAGTAGAGCTAATCCAAGAGTTGGGAAAGCTAAAACAACTAAGAGGATTGGTCTTGCTCAATGTTAAGGAGGAACATATGAGTGTCATATCTTCCTCAATCAATGAGATGCAACAATTGGAGATGTTGCATATTACGAAAATCAACGAAGATACATTCATTGATTTGGATTTGAATTCACCCCAACCGATGCTTAGCATAGTTAAACTTGATGGTCGGATGTCAAAGAAGTTTCCTGAGTGGATTTCAAAACTTCAAAATCTTATTGAGCTAAGAGTGCAACTTGTGGATTCCATGCAAATGGATGATGCAATGAAATTACTCAAAAGTATGCCAAGCTTGCTGTCCCTCAGTATCTCCTACCATTATGATCAAATTGGAGTTGTTGAAAGGTTACATTTTCAAGATGGATCGTTTAAGAATTTGAAGGAGCTACATATTGTTTTTTTCCTTGCCTTGAGGTACATACTTATTGACGAAGGTGCGTTGGGTTCACTAAAAGAGCTCCAATTATACTACATCCCCAAACTAATGTCATTACCAACTGGCATTCAACACTTATCCAAGCTTGAAGTTCTAAGTTATTCATATCCCAATGAGGAATTTGAGGAAAGTATTGCTTTAGAAGAAAGAAAAGAGCATTCGATCTTCAAGCATGTGCTCTTGAAAGAATTACTCCCTCCGGACATAAATCTAAACAACACACTTTTTAGATTATTTGAATAA 2883 0.3732 MCDPCASVFSCARENLLPLARKHLFPLALDHLLPILKEGVNMIRGIPNDEIAQMKHELETIEEFIHQADKMADAEGDHPSDDGIGTREKIKQLIEASFRIQDIIDEYIIREEQQFPDPGCAAGASDYVKTKFLRLQIAHDIHSIKSQINEMKETCFETDHEGSSSFVSNLNDATSLQNLRDDPFYLDEADVVGFEKPRGILIDYMVKGRKELTAVSVVAMGGQGKTTLAKKVFDSKEVMGHFEFRVWITVSQSYDIEELLRYMLKELCKQQNVHPEIIHEMKIHEMNRRPLVEKVRNYLQQKRYVVVFDDVWSLNFWGDIKLAMIDNKKGCRILITTRTMDVATSCRESCFVEILELKGLNDEHSLKLFNKKAFHDLIGRCPENLVAISSKIVKKCDGLPLAIVVTGGLLSCKNRSYVDWYKFSENMNLELNKDSKINKLLALSYHDLPYNIKSCFLYFGLYPEDCIVPSKMLTLQWIAEGFVKEDRGRTLEEVAEGYLTMLIHRSLVQVVSITIDGRAKSCRVHDLVHAMILKKCEDLSFCKNISEDKQSSLTGMARRLSIADSSDNLMESIENSQVRSLIVYKPKKISLSFVRRIPTKYRRLKMLNIDDDRLHDVPEDLQCLSHLKYFRFRNGRGNDMYFPLPESIGMMGNLETLDLADTYYYEPMPKEICMLRKLRHFIGDQLDLIPLKDGIGGMTSLQTLPKVYFSPFRAERDNEVVELIQELGKLKQLRGLVLLNVKEEHMSVISSSINEMQQLEMLHITKINEDTFIDLDLNSPQPMLSIVKLDGRMSKKFPEWISKLQNLIELRVQLVDSMQMDDAMKLLKSMPSLLSLSISYHYDQIGVVERLHFQDGSFKNLKELHIVFFLALRYILIDEGALGSLKELQLYYIPKLMSLPTGIQHLSKLEVLSYSYPNEEFEESIALEERKEHSIFKHVLLKELLPPDINLNNTLFRLFE* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3589 960 Gene3D - 27 153 - -
Tpr3g3589 960 SUPERFAMILY RNI-like 575 867 - -
Tpr3g3589 960 Gene3D - 189 353 IPR027417 -
Tpr3g3589 960 PANTHER DISEASE RESISTANCE PROTEIN RP 53 894 IPR044974 GO:0006952
Tpr3g3589 960 Pfam Rx N-terminal domain 28 114 IPR041118 -
Tpr3g3589 960 Gene3D - 445 536 IPR036388 -
Tpr3g3589 960 Pfam NB-ARC domain 205 438 IPR002182 GO:0043531
Tpr3g3589 960 Gene3D Ribonuclease Inhibitor 539 943 IPR032675 -
Tpr3g3589 960 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 459 IPR027417 -
Tpr3g3589 960 PANTHER - 53 894 - -
Tpr3g3589 960 Gene3D - 359 444 IPR042197 -
Tpr3g3589 960 CDD RX-CC_like 27 153 IPR038005 -
Tpr3g3589 960 PRINTS Disease resistance protein signature 214 229 - -
Tpr3g3589 960 PRINTS Disease resistance protein signature 298 312 - -
Tpr3g3589 960 PRINTS Disease resistance protein signature 396 410 - -
Tpr3g3589 960 PRINTS Disease resistance protein signature 649 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3589 Tpr-Chr3 39770191 39775350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3589 211 415 WRKY Transcription Factor Family AT5G45050 28.241 6.40e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3589 K13457 - gmx:100819372 735.332