Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3587 ATGGCTTCTCATCATATCCAATATTTCATTGTTCTCTTAATGGCCACATTATTTATCACAATTCAATCCCATTCCCATGCAAAACTAACTCCTGATTTTTACAACGATGTTTGCCCTCAGGCATTGCCAATCATTAAATCAATTGTTAGCCAAAAACTTAACTTTAAACCACGCATGGGAGCACATTTACTAAGATTGCATTTCCATGACTGTTTTGTCAATTTGGGAGGTCCAACATATTGGTATGAAGTTCTACTAGGAAGAAGAGATGCTAGAAATACTACAAAAGAAGCAGCTGAATTATATCTTCCTTCACAACTTTTCAACTTCTCCCAACTCGTTTCTAACTTTAAGTCTCAAGGCCTAAACCTTAAAGATCTTGTAACTCTATCTGGTGCTCACACAATTGGAATGGCTAGGTGTTCTACCTTTAAGGATAGAATCTACAATGACACCAACATAGACCCAAATTTTGCAATTTCGTTACAACAAAATTGTCCTATAAAAGGTGGTGATGACAATATGGAAGCATTGGATTATGTCACACCTGAAAAATTTGACAATTCATATTACAAAAATTTGGTTAGTAAAAAAGGTCTCTTCCATTCTGATCAAGAACTCTTTAATAATGGTATTGATTGTGAAAGTGACATGTTGGTGGAACTCTATAGTGGAGATTCAAATGTTTTTGCAAGAAATTTTGGAACTTCTATGATTAAGATGGGTAATATAAAGCCTCTTACCGGAATTTTCGGAGAGATTAGAACCGATTGTACCAAAGTTAACTAG 789 0.3485 MASHHIQYFIVLLMATLFITIQSHSHAKLTPDFYNDVCPQALPIIKSIVSQKLNFKPRMGAHLLRLHFHDCFVNLGGPTYWYEVLLGRRDARNTTKEAAELYLPSQLFNFSQLVSNFKSQGLNLKDLVTLSGAHTIGMARCSTFKDRIYNDTNIDPNFAISLQQNCPIKGGDDNMEALDYVTPEKFDNSYYKNLVSKKGLFHSDQELFNNGIDCESDMLVELYSGDSNVFARNFGTSMIKMGNIKPLTGIFGEIRTDCTKVN* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3587 262 SUPERFAMILY Heme-dependent peroxidases 29 262 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Tpr3g3587 262 CDD secretory_peroxidase 28 261 IPR033905 GO:0004601|GO:0042744
Tpr3g3587 262 Pfam Peroxidase 75 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 ProSitePatterns Peroxidases proximal heme-ligand signature. 126 136 IPR019793 -
Tpr3g3587 262 ProSiteProfiles Plant heme peroxidase family profile. 61 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 Gene3D - 29 75 - -
Tpr3g3587 262 PANTHER CATIONIC PEROXIDASE 76 261 - -
Tpr3g3587 262 PANTHER CATIONIC PEROXIDASE 10 74 - -
Tpr3g3587 262 Gene3D - 76 262 - -
Tpr3g3587 262 Gene3D Peroxidase, domain 2 104 241 - -
Tpr3g3587 262 PANTHER PEROXIDASE 72-RELATED 76 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g3587 262 PANTHER PEROXIDASE 72-RELATED 10 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3587 Tpr-Chr3 39744559 39746916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3587 3 262 Peroxidase AT5G58400 37.846 3.91e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3587 K00430 - gmx:100810852 240.736