Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3584 ATGAAAGTACAATCAACTATGAAGCTTCAGAATCTGAACCAAAACCCTTCAAAATCAAATTTTGAAACAAACCCATCATGCAAAACCTCCACAAAAACCCAAACCCGGAAAAACAAGCTTATCCGGATCATTCTCACCGATTACGACGCAACCGATTCGGACTCTTCCGACGATGAAGAGAGAAAAAACCCATCAAAATTTCCAAGAGGAAAGAGAGAAATTACCCAAATCACTATGCAATATCCTCTTGTTTCTAATTCTCCAACAATTTCACCTTCTTCTTCATCTTGCTCCGTTGACCCGACCCGTTTCAAAAGATCCAGAAAATCACCCACCGGTTCTAACAATTGTCGCCGGCAAAGCATGTACCGTGGTGTTCGTCAGAGACCTTGGGGACGGTGGACAGCTGAGATCTGTGACCCGAATCAAAAAAAACGGGTCTGGTTAGGAACTTTTGACACGGCGGAGGAAGCCGCCGCTAAATACGACGAAGCCGCCGTGAAATTTAGAGGTTCAAAGGCTGTTACTAACTTTCCAAACCGCCCCGCCGTTAAGGATGTTAACGAGCCAGCGAAGATTTTCTCCGGCGACGGTTTTGCTTCTCCGACTTCTGTTTTGCCTTTGTACGACGGTGATTCAACGCCGTTTGACGGTTTACGTTACGGCGCAGTGGATGCTTTTGGGTTCGAAATTGACGCGCCGTTAAGTTTAACGGACATTAACTTTGTTCCGTTTGGGAAAGAAAAAGAAGAGTTTGGCGAGTTTGACTTGGACGAGTTCTTGACGTGGCCAAGTTAA 798 0.4549 MKVQSTMKLQNLNQNPSKSNFETNPSCKTSTKTQTRKNKLIRIILTDYDATDSDSSDDEERKNPSKFPRGKREITQITMQYPLVSNSPTISPSSSSCSVDPTRFKRSRKSPTGSNNCRRQSMYRGVRQRPWGRWTAEICDPNQKKRVWLGTFDTAEEAAAKYDEAAVKFRGSKAVTNFPNRPAVKDVNEPAKIFSGDGFASPTSVLPLYDGDSTPFDGLRYGAVDAFGFEIDAPLSLTDINFVPFGKEKEEFGEFDLDEFLTWPS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3584 265 MobiDBLite consensus disorder prediction 1 40 - -
Tpr3g3584 265 PIRSF PTI6 7 265 IPR017392 GO:0003700
Tpr3g3584 265 MobiDBLite consensus disorder prediction 78 101 - -
Tpr3g3584 265 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 261 - -
Tpr3g3584 265 Gene3D AP2/ERF domain 122 181 IPR036955 GO:0003700|GO:0006355
Tpr3g3584 265 Pfam AP2 domain 123 171 IPR001471 GO:0003700|GO:0006355
Tpr3g3584 265 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI6-LIKE 33 261 - -
Tpr3g3584 265 SMART rav1_2 122 185 IPR001471 GO:0003700|GO:0006355
Tpr3g3584 265 MobiDBLite consensus disorder prediction 55 69 - -
Tpr3g3584 265 MobiDBLite consensus disorder prediction 1 117 - -
Tpr3g3584 265 ProSiteProfiles AP2/ERF domain profile. 122 179 IPR001471 GO:0003700|GO:0006355
Tpr3g3584 265 CDD AP2 121 180 IPR001471 GO:0003700|GO:0006355
Tpr3g3584 265 SUPERFAMILY DNA-binding domain 121 180 IPR016177 GO:0003677
Tpr3g3584 265 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Tpr3g3584 265 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3584 Tpr-Chr3 39731074 39732535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3584 28 206 AP2-EREBP Transcription Factor Family AT4G27950 41.872 3.88e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr3g3584 AP2 4.9e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3584 K13434 - gmx:102660028 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3584 3 39731074 39732535 Tpr3g3584 3 39731074 39732535 ECH
Tpr3g3584 3 39731074 39732535 Tpr4g2969 4 34133746 34135499 PCT