Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3578 ATGTTTCTTTCAAATGGTTGTTGCAAGCATGTAATTGTTTTCATCATCTTATGGTTCTGCTGCTGCTTGATTCCGGCTGCTGCCCAAGTTATCAATGTCACTGACCCTACTGAAGTGCTAGCATTGAGAAACATACATGGAAGTTTAATTGATCCAAATGGACATTTGAGCAATTGGAATAGTGATGGAGATCCATGTCTATCTAACTGGACAGGAGTTGTGTGTTCTAATCAAACAATTGAAGAAAACTTTCTACATGTTGTAGAGTTGGAACTACTGAAATTGAACTTGTCTGGAAAATTAGCACCAGATATTGGCAACTTAGCTTATTTGAAAATATTGGATTTCATGTGGAACAACATAAGTGGGGAAATTCCAGTGGAAATTGGCAATATCAAATCTTTGGAACTAATATTCCTAAGTGGAAATGAATTAACAGGACCAGTGCCAGAGGAACTTGGCTTTCTTCCAAACCTACGTATAATGCAAATTGATGATAACAAATTATCAGGACCAATACCTTTATCATTTGCAAATTTGAACAAAACAAAGCACTTTCACATGAACAATAACTCCCTTAGCGGGCAAATTCCAGCAGAACTTTCAAAATTACCAAACCTTATTCATCTACTTCTGGACAACAATAACTTCTCAGGAATTCTTCCACCTGAGCTATCCAAAACGCCAAACTTGACTATACTCCAACTCGACAACAATAACTTTCGTGGAAATAGCATTCCAGATACTTATGCCAACATGTCAAAACTGGTGAAGTTGAGCCTTAGGAATTGCAACTTGCAAGGACCAATTCCTGATTTAAGCCAGATACCACACCTCCTTTATATTGACCTCAGCTTCAATCAGTTGAATGAATCAATTCCTCCTAATAAGCTTGGTGAAAATATCACAACCATTATTTTATCGAACAACAATCTTACCGGAACTATTCCATCCAATTTTTCTCGTCTTCGACGTCTCCAGAAATTGTCTCTTGCAAACAATTTATTGAGTGGGAGTGTTCCTTCCACAATTTGGCAGAACAAGATTTCAAATGCTGCAGAAAGATTGCAATTAGAGTTGCAAAACAACCGATTTATAAGCATATCAGGGAGTACTAACCTTCCACCAAATGTTACACTCTTGCTTGATGGGAATCCCCTATGTTCAGATAACACACTGAATCAGTTCTGTAAAGTTGAAGGAGCTAGAAGTGAAACAAATGGCACATCTCCTACAAACTTCAGTGACCCTTGTCCAAATCAAAGATGTCCACCTCCTTATGAATTCTATGTGAATTGTTTCTGTGTGGCTCCATTGATTATTGGTTATCGATTGAGAAGTCCTGGTTTTTCATATTTCCCTCCATATTTCAATACATTTGAGGAATACTTGACTTCAAATCTTAAGTTACATGCCAATCAGATAAGCTATACTTTTGATTGGCAAGTAGGACCTCGAGTTTTAATGATCTTGAAGATTTTTCCTGAATATGTTGATAAAAATAGTTCTCATACTTTCAATTCAACTGAGATCCAACGGATCAGAAACATGTTCACTGGATGGGTTATTCCTAACCGTGATTTGTTTGGGCCTTATGACCTGATGGACCTGGTTCCTTATAATAATGGGACTAACACTTCTTCAAAATCTGGCATAAGCACGGGTGCTTTGGTTGGCATAATCTTAGGCTCAATTGCGTGTGTAATATCGTTGTCTGCTGTTTTTATTCTTTTAATATTAAGAATAAGATTAAGACGTCATGATGCAGTTTCCAAGCCACGCCATTCATCTAAGATCTCAATACAAATTGATGGCACAAGAGCCTTTACTTATGAAGAGTTGTCCGCTGCTACAAACAATTTTGACAACAATGCTCAAATTGGACAAGGAGGCTATGGGAAGGTTTATAAAGGTATTCTTTCTAATGGCACTGTGGTAGCCATAAAGCGTGCACAGCAAGGATCACTACAAGGTGAGAAGGAGTTCCTTACAGAAATATCAATACTATCAAGGCTACATCATCGTAACCTTGTGTCTCTGGTTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCGAATGGCACACTAAGAGACCACCTTTCTGAAAAGCCTTTGACTTTTGCTATGAGATTGAAGATAGCATTAGAGTCAGCTAAAGGTCTCATGTATCTACACACAGAAGCTGATCCTCCAATATTTCATCGAGATGTTAAGTCAAACAACATATTATTGGACTCTAAGTTCACTGCAAAAGTCGCAGATTTTGGACTTTCAAGGCTTGCCCCAGTTCCAGATGTTGAAGGAATTATACCTGGTCATGTATCCACAGTGGTAAAGGGGACTCCGGGTTACCTTGATCCGGAGTACTTCTTAACTCGTGCTTTGACCGACAAGAGTGATGTTTACAGTCTTGGTATTGTATTTCTTGAACTTTTTACTGGGATGCACCCTATTTCACATGGCAAAAATATTGTTAGAGAGGTTAATGTTGCATACGAATCGGGTAAGATTTCTTCAGTTATTGACGAACGCATGGGGTCTTATCCATCTGATCATGCTGAGAAGTTTTTAAATTTGGCCCTAAAGTGTTCTGAAGACGAGCCAGAACCGCGTCCTAAAATGGCAGAAGTGGTTAGAGAGCTTGAAAACATTTGTTCTATGATGTCAGATTCAGATACCACGAGAAGTACATCTACAAGCACCGATTCCCGCAAAACAGTCAGCTTTCTAGGCAGTACACCTTCTTCATCATCAACCATAAAGACTCCTTCTGCATCAAGAAATATATAA 2808 0.3843 MFLSNGCCKHVIVFIILWFCCCLIPAAAQVINVTDPTEVLALRNIHGSLIDPNGHLSNWNSDGDPCLSNWTGVVCSNQTIEENFLHVVELELLKLNLSGKLAPDIGNLAYLKILDFMWNNISGEIPVEIGNIKSLELIFLSGNELTGPVPEELGFLPNLRIMQIDDNKLSGPIPLSFANLNKTKHFHMNNNSLSGQIPAELSKLPNLIHLLLDNNNFSGILPPELSKTPNLTILQLDNNNFRGNSIPDTYANMSKLVKLSLRNCNLQGPIPDLSQIPHLLYIDLSFNQLNESIPPNKLGENITTIILSNNNLTGTIPSNFSRLRRLQKLSLANNLLSGSVPSTIWQNKISNAAERLQLELQNNRFISISGSTNLPPNVTLLLDGNPLCSDNTLNQFCKVEGARSETNGTSPTNFSDPCPNQRCPPPYEFYVNCFCVAPLIIGYRLRSPGFSYFPPYFNTFEEYLTSNLKLHANQISYTFDWQVGPRVLMILKIFPEYVDKNSSHTFNSTEIQRIRNMFTGWVIPNRDLFGPYDLMDLVPYNNGTNTSSKSGISTGALVGIILGSIACVISLSAVFILLILRIRLRRHDAVSKPRHSSKISIQIDGTRAFTYEELSAATNNFDNNAQIGQGGYGKVYKGILSNGTVVAIKRAQQGSLQGEKEFLTEISILSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDHLSEKPLTFAMRLKIALESAKGLMYLHTEADPPIFHRDVKSNNILLDSKFTAKVADFGLSRLAPVPDVEGIIPGHVSTVVKGTPGYLDPEYFLTRALTDKSDVYSLGIVFLELFTGMHPISHGKNIVREVNVAYESGKISSVIDERMGSYPSDHAEKFLNLALKCSEDEPEPRPKMAEVVRELENICSMMSDSDTTRSTSTSTDSRKTVSFLGSTPSSSSTIKTPSASRNI* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3578 935 SUPERFAMILY L domain-like 64 400 - -
Tpr3g3578 935 Pfam Protein kinase domain 623 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3578 935 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 913 - -
Tpr3g3578 935 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Tpr3g3578 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Tpr3g3578 935 SMART serkin_6 621 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3578 935 MobiDBLite consensus disorder prediction 894 935 - -
Tpr3g3578 935 Gene3D Ribonuclease Inhibitor 192 295 IPR032675 -
Tpr3g3578 935 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 913 - -
Tpr3g3578 935 CDD STKc_IRAK 627 890 - -
Tpr3g3578 935 Gene3D Ribonuclease Inhibitor 296 410 IPR032675 -
Tpr3g3578 935 SUPERFAMILY Protein kinase-like (PK-like) 595 887 IPR011009 -
Tpr3g3578 935 ProSiteProfiles Protein kinase domain profile. 621 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3578 935 Gene3D Phosphorylase Kinase; domain 1 591 696 - -
Tpr3g3578 935 Gene3D Transferase(Phosphotransferase) domain 1 697 913 - -
Tpr3g3578 935 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Tpr3g3578 935 Gene3D Ribonuclease Inhibitor 36 191 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3578 Tpr-Chr3 39636804 39651290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3578 20 899 Receptor kinase-like Gene Family AT5G01950 54.911 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tpr3g3578 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3578 - - gmx:100786467 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3578 3 39636804 39651290 Tpr4g2979 4 34227053 34236490 PCT