Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3577 ATGTATCTTTCAAAAGGTTACAAGCATGAAGTTGTTTTCATTTTATGGTTTTGCTGCTATTTGGTACTTGTTGCTGCACAGGATAATATCACTGACCCTACTGAAGTTGAAGCATTAAAAGCCATAAAAAAAAGGTTGATTGATCCTAATAGAAATTTGAGCAATTGGAATCGCGGAGACCCTTGTACATCTCGTTGGACAGGAGTTTTGTGTTTCAATGAAACATTATTCGATGGCTATTTACATGTTCAAGAATTGCAACTAATGAATTTGAGCTTGTCCGGAAATTTGGCACCAGAAATTGGCAGCTTACTTTATATGGAAAGATTGAACTTCATGTGGAACAAAATAACTGGGAGTATTCCAAAGGAAATTGGCAATATCAAATCTTTATTCCTCTTGCTTCTGAATGGAAATCAGTTAACAGGACCACTACCAGATGAGCTTGGCTTTCTTCCGAACCTTGATCGAATACAAATTGATCAGAACAATATATCAGGACCTCTACCTAAAACATTTGCAAACCTGGACAAGACAAAGCACTTTCACATGAACAATAATTCAATTAGCGGGCAAATCCCACCGGAACTCTCCAAACTACCAAAACTCGTTCACTTCCTTCTTGACAATAACAAGTTATCAGGATATCTTCCTCCTGAGCTATCGAAACTTCCGAGCTTACTTATACTTCAACTTGACAACAATAACTTCGAAGGAAATAGCATTCCAGATACTTATAGTAACATGTCAAAATTGTTGAAGCTGAGCCTTAAGAATTGCAACTTGAAAGGACCGATTCCCGACTTAAGCCGGATACCAAACCTTCTTTATCTTGACCTGAGTTCCAATCAGTTGAATGAATCACTTCCTTCCAAACTTTCAGAACACATCACAACCATTGATTTATCCAACAACGAGCTTACGGGAACCATTCCGTCCTCGTTTTCTAGTCTTCCACATATTCAGAAGTTGTCTCTTGCAAACAATTCATTGATTGGCAGCGTTCCTTCCACGATTTGGCAGGACAAGATTTCAAATGAAACAGAAAGATTTATCTTGGAGTTGGAAAATAATCAATTTACAACTGTATCAGGCAATGCCGATCTTCCTCAAAATGTCACAGTCTTGCTTTATGGGAATCCCCTATGCTCAAATAACAGCCTGATTCAGCTCTGTAGATCTGAAAGTGTTAATGACACAAGTGACCTTGTTCCAACAAATGGCAATGGCATCTGTCGTGCTCAATCATGCCCGCCGCCTTATGAATTCTCTTTGGATTGTTTCTGTGCAGCCCCATTGCTTGTTCGTTATCGACTAAAAAGTCCCGGGTTTTCGGATTTCGTTCCATTCATAAATGATTTTGAGGAATACCTGACTACTGGTCTTAGTATAAATATGAGTCAGCTAAACTTTACTTTTCGGTGGGAAGCAGGACCTCGACTCAGAATGGACTTGAAGTTCTTTCCTGTATATTTTGGTCCAAATAGTTCTCATACTTTCAATGAAACTGAGGTCCAACGGATTAAAAGCATGTTCACTGGATGGAATATTCCTGACAGTGATTTGTTTGGGCCATATGAATTGTTGAACTTCAATCTAGGTTTTTACCAGAATGCGACTACCACCTCTTCAAAATCAGGGATAAGTACAGGAGCGATAGTTGGCATAGTCTTAGGGGCAATTGCATGTGCAGTGACGCTATCTGCGATTGTTACTCTTCTTATATTAAGAACAAAATTGAAAGATTATCGTGCAGTTTCCAAAAGGCGTCGTGTGTCTAAAACCTCAATAAAAATGGATGGCGTAAGGTCTTTCACTTATGAAGAATTATCCTCTGCTACGAACAATTTTAGCAGCTCTGCTCAAGTCGGACAAGGGGGATATGGGAAAGTATATAAAGGTATTATTTCTGATGGCACTGCCGTTGCTATAAAACGTGCACAAGAGGGATCACTGCAAGGCGAAAAGGAGTTCCTTACAGAAATATCATTACTATCAAGGTTACATCATCGCAACCTTGTGTCTCTGATCGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAGTATATGCCAAACGGAACACTAAGGGATCACCTTTCTGTTACTGCAAAAGAACCTCTGACTTTTATCATGAGATTGAAGATTGCATTAGGATCAGCTAAAGGTCTCATGTATCTACACAATGAAGCTGATCCTCCAATATTTCATCGAGATGTCAAGGCCAGCAACATATTATTGGACTCTAAGCTCTCTGCAAAAGTTGCTGATTTCGGACTTTCCCGGCTTGCCCCAGTTCCAGATATGGAAGGAATTGTGCCTGGTCATGTATCTACTGTGGTAAAGGGGACACCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTACAGTCTTGGTGTTGTGTTTCTTGAAATTTTGACCGGAATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTCAATCTTTCATACCAATCGGGCGTAATATTTTCAATCATCGATCCACAAATGGGCTCATATCCATCTGAACATGTGGAGAAATTTTTGACATTGGCCCTCAAGTGTTGTAACGACGAGCCAGATAATCGGCCTAAAATGGCAGAAGTGGTTAGAGAGCTCGAAAACATATGGAATGTGATGCCGGAATCAGATACAAGGAGAGCTGAATCTATAACTAGTGTCAGTGATTCAAGCAAAGCAATGAGCACGCCATCTTCATCATCTGCTATAAGGACTCCTTTTGTATCAGGTGATGTATCTGGTAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG 2847 0.3994 MYLSKGYKHEVVFILWFCCYLVLVAAQDNITDPTEVEALKAIKKRLIDPNRNLSNWNRGDPCTSRWTGVLCFNETLFDGYLHVQELQLMNLSLSGNLAPEIGSLLYMERLNFMWNKITGSIPKEIGNIKSLFLLLLNGNQLTGPLPDELGFLPNLDRIQIDQNNISGPLPKTFANLDKTKHFHMNNNSISGQIPPELSKLPKLVHFLLDNNKLSGYLPPELSKLPSLLILQLDNNNFEGNSIPDTYSNMSKLLKLSLKNCNLKGPIPDLSRIPNLLYLDLSSNQLNESLPSKLSEHITTIDLSNNELTGTIPSSFSSLPHIQKLSLANNSLIGSVPSTIWQDKISNETERFILELENNQFTTVSGNADLPQNVTVLLYGNPLCSNNSLIQLCRSESVNDTSDLVPTNGNGICRAQSCPPPYEFSLDCFCAAPLLVRYRLKSPGFSDFVPFINDFEEYLTTGLSINMSQLNFTFRWEAGPRLRMDLKFFPVYFGPNSSHTFNETEVQRIKSMFTGWNIPDSDLFGPYELLNFNLGFYQNATTTSSKSGISTGAIVGIVLGAIACAVTLSAIVTLLILRTKLKDYRAVSKRRRVSKTSIKMDGVRSFTYEELSSATNNFSSSAQVGQGGYGKVYKGIISDGTAVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSVTAKEPLTFIMRLKIALGSAKGLMYLHNEADPPIFHRDVKASNILLDSKLSAKVADFGLSRLAPVPDMEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEILTGMHPISHGKNIVREVNLSYQSGVIFSIIDPQMGSYPSEHVEKFLTLALKCCNDEPDNRPKMAEVVRELENIWNVMPESDTRRAESITSVSDSSKAMSTPSSSSAIRTPFVSGDVSGSDLVSGVIPSIKPR* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3577 948 Gene3D Transferase(Phosphotransferase) domain 1 693 913 - -
Tpr3g3577 948 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Tpr3g3577 948 SMART LRR_typ_2 152 175 IPR003591 -
Tpr3g3577 948 SMART LRR_typ_2 224 248 IPR003591 -
Tpr3g3577 948 SMART LRR_typ_2 272 296 IPR003591 -
Tpr3g3577 948 SMART LRR_typ_2 318 342 IPR003591 -
Tpr3g3577 948 SMART LRR_typ_2 200 223 IPR003591 -
Tpr3g3577 948 MobiDBLite consensus disorder prediction 900 922 - -
Tpr3g3577 948 ProSiteProfiles Protein kinase domain profile. 617 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3577 948 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Tpr3g3577 948 Pfam Leucine rich repeat 296 332 IPR001611 GO:0005515
Tpr3g3577 948 SUPERFAMILY L domain-like 46 396 - -
Tpr3g3577 948 Pfam Protein kinase domain 619 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3577 948 CDD STKc_IRAK 623 889 - -
Tpr3g3577 948 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 917 - -
Tpr3g3577 948 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Tpr3g3577 948 SMART serkin_6 617 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3577 948 Gene3D Ribonuclease Inhibitor 269 415 IPR032675 -
Tpr3g3577 948 Gene3D Phosphorylase Kinase; domain 1 587 692 - -
Tpr3g3577 948 SUPERFAMILY Protein kinase-like (PK-like) 602 912 IPR011009 -
Tpr3g3577 948 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 917 - -
Tpr3g3577 948 Gene3D Ribonuclease Inhibitor 202 268 IPR032675 -
Tpr3g3577 948 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Tpr3g3577 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3577 Tpr-Chr3 39596423 39606143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3577 18 899 Receptor kinase-like Gene Family AT5G01950 58.417 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Tpr3g3577 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3577 - - gmx:100786467 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3577 3 39596423 39606143 Tpr3g3577 3 39596423 39606143 ECH