Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3563 ATGAAGGTCCAATTTGATTCGCAGTTTTTCACATCCATTGTTTTTATCAGTTTTGTAGCACTATTGTTTCGTTTGTACACTAGTTTTGTGCACAAGCCAAATGTTCTTCGTTCTAAGCTAAGGAAACAAGGTATAAGTGGTCCACCTCCAACTATACTTCTTGGAAATCTAATGGAGATAATGAAATCTCAGCTTACCATTCCAATTTCTCATTCTTTTCTCACTCACAACACTGCTTCTCTTGTCTTTCCCAAATTTGAAGAATGGAGGAAACAATATGGTGAAGTTTTCGTGTTTTCTTTTGGAAACATTCAATCATTGTGTGTGAGCCAAACAGACATGATAAAAGAAATCACCACATACACTTCTTTTGACTTGGGGTTACCTCCATTTCACAAGAAACTTTTTAGGCCTTTGTTAGGTGATGGTATTTTAACATCAAATGGGACTACATGGGCCCATCATAGAAAGATCTTAGCTCCAGAACTATACATCGATAAAGTTAAGGGAATGGTGAATATTATTAGTGAGGCTGGTGAATCTCTGCTAAACTTATGGAATAGTAAAATAGAGGCTCAAAGTGGAGTTGCTGATATAAATATTGATGAGGACTTGAAAATATTCTCTGGTAATGTTATTTCAAGAGCATGCTTTGGAAGTGATTATTCCAAGGGGCAAGAAATATTCTTGAAACTTGGAGCTCTCCAAGAAGTTGGTTTTTCCTGGAAAAATCTCTCTTCAGCAGTTCCTGGCATGAGATACCTTCCAACAAAGACTAACAGAAAATCATGGATATTAGCAAAGGAGGTGAAAAGTTTGATACTTCAAGTGGTGAAGGAAAGAAAGGAAAAAACTAGTTTTGAAAAGGACTTGCTGCAAATGGTTATTGAAGGTGCCAAGAAAAGTAATCTCACACAAGAGGCCGGTGATAATTTTATTATTGATAACTGCAAAAATATATACTTGGCAGGCTTTGAATCAACTGCAGTTGTTTCTTCATGGTGTCTTATGTTATTGGCCTCAAACCAAAATTGGCAAGATCGCGCTCGTGCCGAGGTACTAGAGATTTGCAGAGGTAGAATCCCAGATTTAGATATGCTTTCAAAGATGAAACAGCTTACAATGATTATTCATGAAACTTTGCGCCTATATCCTCCAGCACCATTATTGCTAAGGCATGCTTTCAAGGACATGAAATTTGGGAATATTGATGTCCCCAAGGGCACTGGCCTTTGGATATTGATAATAAGTTTGCATACAAATCCAGATATATGGGGAGATGATGCATACAAATTCAATCCAGAAAGATTTGCTAATGGAGTCGCAGGTGCTTGTAAGCATCCACATGCATATATGCCATTTGGAGTTGGCCCAAGAATTTGTCTTGGACAAAACTTGGCCATACTTGAACTTAAGATGCTCATAGCTCTCATTTTGTCCAACTTCTCTTTCTCACTCTCTCCTAGATACATACATTCACCTGCACTTGGGATTACAATGAAGCCTGACCATGGAGTCCAGCTCCTAGTAAGAAAGCTATGA 1542 0.3794 MKVQFDSQFFTSIVFISFVALLFRLYTSFVHKPNVLRSKLRKQGISGPPPTILLGNLMEIMKSQLTIPISHSFLTHNTASLVFPKFEEWRKQYGEVFVFSFGNIQSLCVSQTDMIKEITTYTSFDLGLPPFHKKLFRPLLGDGILTSNGTTWAHHRKILAPELYIDKVKGMVNIISEAGESLLNLWNSKIEAQSGVADINIDEDLKIFSGNVISRACFGSDYSKGQEIFLKLGALQEVGFSWKNLSSAVPGMRYLPTKTNRKSWILAKEVKSLILQVVKERKEKTSFEKDLLQMVIEGAKKSNLTQEAGDNFIIDNCKNIYLAGFESTAVVSSWCLMLLASNQNWQDRARAEVLEICRGRIPDLDMLSKMKQLTMIIHETLRLYPPAPLLLRHAFKDMKFGNIDVPKGTGLWILIISLHTNPDIWGDDAYKFNPERFANGVAGACKHPHAYMPFGVGPRICLGQNLAILELKMLIALILSNFSFSLSPRYIHSPALGITMKPDHGVQLLVRKL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3563 513 PANTHER CYTOCHROME P450 714C2 15 507 - -
Tpr3g3563 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Tpr3g3563 513 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 SUPERFAMILY Cytochrome P450 47 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 Gene3D Cytochrome P450 42 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 507 - -
Tpr3g3563 513 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3563 513 Pfam Cytochrome P450 68 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3563 Tpr-Chr3 39430884 39435681 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3563 114 510 Cytochrome P450 AT5G24900 44.390 1.40e-121 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3563 K24544 - gmx:100785420 744.191