Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3561 ATGAAGATCCAATTTGATTTGCAGCTTTTCACATCCATTGTGTTCATTGGTTTTGTAGCACTCTTATTTCGCTTGTACACTAGCTTGGTGCATAATCCAAACGTGCTTCGTGCTAAGCTAAGGAAACAAGGTATAAATGGTCCACCTCCAACTATACTTTTTGGAAATTTAATGGAAATAATGAAATCTCAACCCTCCATTCCAAATTCTCCTTGTTCTGAACCCCCTCTTACTCACAACATTGCTTCTCTTCTCTTTCCCAAATTTGAAGAATGGAGGGAACAATACGGCAAACTGTACATGTTTTCTTTTGGAAGCATTCAAACATTATGTGTGAGCCAAACAGACATAGTGAAAGAAATCACCACATGCACTTCTTTTGATTTGGGGAAGAATTCATTTACAAAGAGACTACTTGAGTCTTACTTTGGTGATGGTATTATAACATCAAATGGGACTACATGGGCTCATCATAGAAAGATCTTAGCTCCAGAGTTATACATCAATAAGGTTAAGGGAATGGTGAATATTGTTGGTGAGTCTTGTGAATCTCTACTAAACTTATGGAGTAGTAAAATAGAGGCACAAGATGAAGTTGCGGATATAAATATTGATGAAGACATAAAAAGATTCTCTGGGAATGTTATTTCAAGAGCATGCTTTGGAAGTGATTATTCCAAAGGAGAAAAACTTTTCTTAAATTTTGAAGCTCTCCAAGAAGTTGCTGGTTCATGGAAAAATCTATTATTAGCTTTTCCTGGCATGAGATATCTTCCAACAAAGTCCAATAGAAAAACATGGATGTTAAAAAAGGAGGTGAAAAGTTTGATACTTGAAATGGTGAAGGAAAGAAAAGAAAAAACTAGTTTCCAAAATGACTTGCTGCAAATGGTTATTGAAGATGCCAAGAAAAGTAATCTCACACAAAAGGCCAGTGACCGTTTTATTATTGATAGCTTCAAGAATATATACTTTGCAGGCTTTGAAACAACTGCAGTTACTGCTACATGGTGTCTTATGTTGTTGGCCTCAAATCAAAATTGGCAAGATCGTGCTCGTGCCGAAGTACTAGAAATTTGCAGAGGTAGCACCCCTGATTTTGATATGCTTTCAAAGATGAAGCTGCTGACAATGGTTATTCAAGAATCCTTGCGCCTTTATCCTCCTACGCCTTTATTGTCAAGGAAAACTTTCAAGGACATGAAATTTGGGAATATTGATGTGCCCAAAGACACTGACCTTTGGATATTTATTATAACTATGCATACAAATCCTAATATATGGGGAGATGATGCCTACAAATTTAACCCAGAAAGATTTGCCAATGGAACTGTAGGTGCTTGTAAGCAACCACAAGTGTATATGCCATTTGGAGTTGGCCCAAGAGTTTGTCTTGGACAGAACTTAGCCATGCTTGAACTTAAGATGCTCATAGCTCTCATTTTGTCCAACTTCTCTTTCTCCCTCTCTCCTAGATACATACATTCACCTGCATATGGAATTACAATGAAGCCTAACAATGGAGTCCAGCTTCTAGTAAGAAAACTATAA 1551 0.3701 MKIQFDLQLFTSIVFIGFVALLFRLYTSLVHNPNVLRAKLRKQGINGPPPTILFGNLMEIMKSQPSIPNSPCSEPPLTHNIASLLFPKFEEWREQYGKLYMFSFGSIQTLCVSQTDIVKEITTCTSFDLGKNSFTKRLLESYFGDGIITSNGTTWAHHRKILAPELYINKVKGMVNIVGESCESLLNLWSSKIEAQDEVADINIDEDIKRFSGNVISRACFGSDYSKGEKLFLNFEALQEVAGSWKNLLLAFPGMRYLPTKSNRKTWMLKKEVKSLILEMVKERKEKTSFQNDLLQMVIEDAKKSNLTQKASDRFIIDSFKNIYFAGFETTAVTATWCLMLLASNQNWQDRARAEVLEICRGSTPDFDMLSKMKLLTMVIQESLRLYPPTPLLSRKTFKDMKFGNIDVPKDTDLWIFIITMHTNPNIWGDDAYKFNPERFANGTVGACKQPQVYMPFGVGPRVCLGQNLAMLELKMLIALILSNFSFSLSPRYIHSPAYGITMKPNNGVQLLVRKL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3561 516 Pfam Cytochrome P450 87 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 PANTHER CYTOCHROME P450 714C2 15 510 - -
Tpr3g3561 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 510 - -
Tpr3g3561 516 SUPERFAMILY Cytochrome P450 79 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3561 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Tpr3g3561 516 Gene3D Cytochrome P450 34 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3561 Tpr-Chr3 39421871 39430504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3561 117 513 Cytochrome P450 AT5G24900 42.892 5.44e-117 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3561 K24544 - gmx:100785420 725.317