Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3552 ATGGGTTGCCGATTCAGATGTAATCACAAAATATTGGAAGAGAAGTATCCTAGCCCTCCATTGGTGACTCCACCTGAAAAGGCTACAGCTGGATCAAAGATATTTTCTACATTTATTGGATTTCTCAAGAGCAAAGATCCCAAAGACGGAACAGAACAAACATTACTGAATGAACTAAGCCCCTTCAATGATTACCTCAAGGAAAATGGTCCTTTTATCAATGGGAAAGATATATCTGCAGCTGACTTATCACTTGGACCAAAGCTATACCATTTGGAGATTGCTTTAGGGCATTTTAAGAAATGGAAAATACCTGATTCACTGCCCTTTTTGAAGTCTTACTTCAAGGATATTTTCTCAAGGGAATCATTCATCAACACACGTGCACAGCCGGAGGATGTCATTGAAGGTCGGGGTCCTAAAGTGGAGGGTTGA 435 0.4046 MGCRFRCNHKILEEKYPSPPLVTPPEKATAGSKIFSTFIGFLKSKDPKDGTEQTLLNELSPFNDYLKENGPFINGKDISAADLSLGPKLYHLEIALGHFKKWKIPDSLPFLKSYFKDIFSRESFINTRAQPEDVIEGRGPKVEG* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3552 144 SUPERFAMILY GST C-terminal domain-like 15 137 IPR036282 -
Tpr3g3552 144 Gene3D - 22 144 - -
Tpr3g3552 144 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 10 143 IPR044627 GO:0033355|GO:0045174|GO:0098869
Tpr3g3552 144 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 10 143 - -
Tpr3g3552 144 Pfam Glutathione S-transferase, C-terminal domain 52 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3552 Tpr-Chr3 39317107 39319294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3552 10 144 Glutathione S-transferase Gene Family AT5G16710 73.333 2.30e-71 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3552 K21888 - gmx:732557 232.646