Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3539 TCTCAAAATCCCAACAATTCTCAAAATCCCAACAATTATCAAAACTCCAACAATTATCAAAACCCCAACAATTATCAAAATCCCAACAATTATCAAAATTCAAATCAATTTTTCAATCAACATCCTCAAAACACACCTAATTTTGGTTTAACACCAAATTTCAACCAATCATCCTTTGTTCCAAACTTTCATCCATATTATGGAACTATGCTGAGAAATTCATCTCAAACACCCCCGTTTAATGGTTACATGCCGATGGTTAATGAAATTTTTTCGAGTGGTGGTACAACTAACTTTCCCAAATTTTCAACACAAATAACTATTGCTAATGAAGATTCAACTCCTATGAGCAAGAAAAACCATCAACCATCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATCAAATTTGGAACAAGCAGTGTTGTCGGGAAAAACCAGAAAGGTGAAACATATTGGGGTCAAATTGCTGACTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGAGTTGCATGCCGAAACCGTTTTAATTATATGAACAAAATACTGAGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTCTCCAAGGAAGTGGTTGGTCCGAGAATGATGTTTTGGCAAAAGCGCAGGAAATATATGCATGTGGGAAGAATGTTCGGTTCACTTTAATTGAAGAATGGAATGCTCTCCGTGATCAACCACGTTATAGTAGTCAATTAGGATCTGGAAGTAGTGGATCTAAGAGATCTCACGAGATTGCATCTCATGATCTATGGATCTGGCATGGAAAGACTCCAAGTGTGAATTTCTATGTGAATCAACGTCCCTATGATATGACATACTATCTAGCCGATGGTATCTACCCTTCTTATCCAACATTCGTCAAATCTATTAGACTTCCTCAAAGTGAACCCGATAAGTTATTTGCAAAATATCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTTCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTATGGGACATAGCCGATCTGAGTATCATCATGAGGTCTTGCATCATATTACATAATATGATTGTTGAGGATGAGCGAGATTCATATGCTCAACGTTGGACTGATTTTGAGCAGTCTGAGGAAAGTGGATCTAGTGCACCGCGACCATATTCAACCGAGGTATTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCTGAGTTCCGTGATAAAAAAGCTCATCACGAATTGCAAGCAGATCTAGTGAAGCACATATGGACAAAATTTGGAATGTTTCAGGATTAA 1323 0.3893 SQNPNNSQNPNNYQNSNNYQNPNNYQNPNNYQNSNQFFNQHPQNTPNFGLTPNFNQSSFVPNFHPYYGTMLRNSSQTPPFNGYMPMVNEIFSSGGTTNFPKFSTQITIANEDSTPMSKKNHQPSWNTEQNLVLISGWIKFGTSSVVGKNQKGETYWGQIADYCNEHCSFDPPRDGVACRNRFNYMNKILSKWIGAYDGAKRLQGSGWSENDVLAKAQEIYACGKNVRFTLIEEWNALRDQPRYSSQLGSGSSGSKRSHEIASHDLWIWHGKTPSVNFYVNQRPYDMTYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKYQEGCRKDIERAFGVLQARFKIIREPARLWDIADLSIIMRSCIILHNMIVEDERDSYAQRWTDFEQSEESGSSAPRPYSTEVLPAFANHVRARSEFRDKKAHHELQADLVKHIWTKFGMFQD* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3539 440 Pfam Plant transposon protein 270 374 IPR006912 -
Tpr3g3539 440 PANTHER - 56 257 - -
Tpr3g3539 440 PANTHER PUTATIVE-RELATED 56 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3539 Tpr-Chr3 39224818 39226865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3539 91 257 Glutathione S-transferase Gene Family AT5G41240 28.977 1.54e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3539 - - bna:111202842 341.273