Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3523 ATGCGACGTCAACAACTCAACCTCCTAATAACTACCTTAATCATCTTGTCATCTTCATGTAGCTTAACACAAGCTGATCCTCAAACATGTTTAATCAACAAAGGTTGTAGCACATACAACGCAACAAACTTATCAAATTTCTACAAAAATCTAAAAGCAACATTGTTAGACTTGCAATCAAAAATAGGAAATGAAAACAAACATTTTGCTACGGCACAATCAGCTAGAGGAGCAGATCCTGTTTTTGCTTTGTTTCAGTGTAGAAATTATCTCTCTAATTCTGATTGTTCCGCTTGTTTCGCCGTTGCCGCTGCACAAATCCGGAATTGCTCCGCTGGTTGCAACGGTGCTCGTGTTATTTATGATGGTTGCTTCCTTAGGTATGAAAGCAATGGATTCTTCGACCAAACAACTCTACCTGGCAACAGTGTTCTTTGTGGAACCAAAAAAGCAAATGGAACCACTGCTTATAATGCAACAGCACAACAACTACTATTGGATCTAAAAACAGCAACACCTAAAATTCCTGGTTTCTTTGCAGCTACCAAGACACCAATTGCTGGAAATGCAATATATGCTATTGCACAATGTGCTGAAACAGTCACTGATGGTGGTTGTTTAGCTTGCTTAAAAGTTGGATTCAACAACATACAAGGTTGTTTTCCTAATACAGATGGTATAGCATTTGATGCTGGTTGTTTTATGAGATACTCAGAGATACCTTTCTTTGCTGATAACCAAACCATTGATATTACACCCTTCTTGAAACAAGGAAGTTCAAGTAACAAGGGAGCAATTATTGTTGGTGCTGTTGGAGGTGTAGCCCTTGTTCTGATCCTCCTTGCACTATTTCTTTGGCTTAGGCTCAAGAAGAAACCCAAGAGACATCATAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTACTTACCGGTACAATGATTTGAAGTCGGCAACAAAAAATTTTAGTGATGAAAATAAATTAGGCGAAGGAGGTTTTGGAAATGTATACAAGGGCACTCTAAAAAATGGTAACGTAGTAGCTGTCAAGAAATTGAATTTAGGCCATTCTGGCAAGATGGATGAACAATTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCACAGGAATTTAGTTCGACTTCTCGGATGTTGTAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAACAACAGCCTTGACAGATTCTTATTTGGTGAAAAGAAGGGTTCCCTCAACTGGATGCAAAGGTATGATATAATTTTAGGCACGGCAAGAGGTTTGGCCTATCTGCATGAAGATTTCCATGTTAGCATCATACATAGGGATATAAAGACCGGCAACATTCTCTTAGATGATGATTTTCAGCCTAAAATTGCTGATTTTGGGTTGGCAAGACTTCTACCAGAAGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACTGCACCAGAATATGCTATACATGGTCAGTTATCAGTGAAGGCTGATGCCTACAGTTTCGGGGTTGTAGTCCTAGAAATAATAAGCGGCCAAAAGAGTAGTGAGTTGAGGGAAGATGCTGATGGTGAATTCCTTCTTCAAAGGGCATGGAAACTATACGAGGTAGATCGACACTTAGAGTTAATTGACAAGACATTGAACCCTAGCGACTATGATGCAGAAGAAGTCAAAAAGTTTATAGCAATTGCTTTACTTTGCACTCAAGCAACAGCTGCTACAAGACCAACTATGTCTGAAATAGTAGTTCTACTCAAAAGCAAGAACTTTGTGGAGCATATGAAACCAACTATGCCTGTCTTTGTTAACTCTAACTTGAAGCCTCAGAATCGGACAGACACATATTCCTCGACTGCTTCTGCTTCTTCTACATCTAATGCTACTGTTGCCACTTCTATATTATCAGCTAGGTGA 1947 0.3919 MRRQQLNLLITTLIILSSSCSLTQADPQTCLINKGCSTYNATNLSNFYKNLKATLLDLQSKIGNENKHFATAQSARGADPVFALFQCRNYLSNSDCSACFAVAAAQIRNCSAGCNGARVIYDGCFLRYESNGFFDQTTLPGNSVLCGTKKANGTTAYNATAQQLLLDLKTATPKIPGFFAATKTPIAGNAIYAIAQCAETVTDGGCLACLKVGFNNIQGCFPNTDGIAFDAGCFMRYSEIPFFADNQTIDITPFLKQGSSSNKGAIIVGAVGGVALVLILLALFLWLRLKKKPKRHHRGDILGATELKGPVTYRYNDLKSATKNFSDENKLGEGGFGNVYKGTLKNGNVVAVKKLNLGHSGKMDEQFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANNSLDRFLFGEKKGSLNWMQRYDIILGTARGLAYLHEDFHVSIIHRDIKTGNILLDDDFQPKIADFGLARLLPEDQSHLSTRFAGTLGYTAPEYAIHGQLSVKADAYSFGVVVLEIISGQKSSELREDADGEFLLQRAWKLYEVDRHLELIDKTLNPSDYDAEEVKKFIAIALLCTQATAATRPTMSEIVVLLKSKNFVEHMKPTMPVFVNSNLKPQNRTDTYSSTASASSTSNATVATSILSAR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3523 648 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Tpr3g3523 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Tpr3g3523 648 Gene3D Transferase(Phosphotransferase) domain 1 402 610 - -
Tpr3g3523 648 SUPERFAMILY Protein kinase-like (PK-like) 309 615 IPR011009 -
Tpr3g3523 648 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 641 - -
Tpr3g3523 648 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Tpr3g3523 648 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Tpr3g3523 648 Gene3D Phosphorylase Kinase; domain 1 290 401 - -
Tpr3g3523 648 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Tpr3g3523 648 ProSiteProfiles Gnk2-homologous domain profile. 139 242 IPR002902 -
Tpr3g3523 648 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 641 - -
Tpr3g3523 648 CDD STKc_IRAK 331 597 - -
Tpr3g3523 648 Gene3D - 28 133 IPR038408 -
Tpr3g3523 648 Gene3D - 142 242 IPR038408 -
Tpr3g3523 648 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Tpr3g3523 648 Pfam Salt stress response/antifungal 146 238 IPR002902 -
Tpr3g3523 648 ProSiteProfiles Protein kinase domain profile. 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3523 648 SMART serkin_6 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3523 Tpr-Chr3 39077444 39082650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3523 13 648 Receptor kinase-like Gene Family AT1G70520 36.252 7.02e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g3523 PK_Tyr_Ser-Thr 6.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3523 - - gmx:100813585 939.488