Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3522 ATGGTGCTCCAACTCAAGCTAGTGTTCATAACGTTGGTGTGTTGGAACATAGTAATTAATTATGATTGTGTAGTACTTGGTGATTCACAAACAAGTATAGTACTAAACAATGGATGTAGCACATATAACGCACCAAATTTACGTAGCTTCTATGCAAATATTAATGGAACATTTTTAGATTTGAGAAACCAAATTAGCAATCAAAGCAAACACTTTGCCACATCACAACAAGCCATAGGAGAGGTAATAGTATATTCTATGTTTCAATGTAGAAATTACCTCTCCAAAAATGATTGTGTTGGTTGCTTCAATATTGCTTCTACTAAAATTCGTAATTGTTCAGCTTCTAATGGTGCTAGACTCATCTATGATGGGTGTTTCCTAAGGTACGAGAGTGAAAGATTCTACGACCAAACAACTCAACCTGGAAGTGGTATATCATGTGGGAACAAGACATCAAAAGAAGGCACTGCATTTGAAACAATTGGACAAAAAGTACTAATGGATCTTCAATTAGCAACACCAAAAATTAAAGGGTTTTTTGCAGCTACTAAGACACAAGTGACTCCTAGTAGTAACAGTTCAATTTATGCCATTGCACAATGTGTTGAAACTGCCACAGAAAGTAGTTGTTTAAATTGCATGACAGGTGGATACAACAACTTGCAAACTTGTCTTCCTAACACAGATGGTAGAGCTTATGATGCAGGGTGTTTTATGAGATACTCAGAGACGCCCTTTTTTGCTGATAATCAGACTATTGATATCACAACCTATTTAAATAAAGGAGGTTCAAGCAACAAATGGGCCATTATAGGTGGTGTTGTTGGAGGTGTAGGACTTCTGGTGATCATTCTTGCAATTTTAGTTTGGCGCCGATACAGAAAACCCAAGAGGACTCCTAGAGGTAACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAACTACAAGTATAGTGATTTGAAAGCTGCAACAAAAAACTTTAGTGATGAAAACAAATTAGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAATGTTGTAGCAGTGAAGAAACTAGTTTTGGGCAAATCAAGCAAAATAGACAATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCATAGGAATCTTGTTAGACTTCTTGGTTGTTGCAGTAAAAATCAAGAGAGAATTCTTGTCTATGAATACATGGCAAACAGCAGCCTAGACAAATTCTTATTTGGTGACAAACAAGGTTCCCTCAATTGGAAACAAAGGTGTGATATAATTTTTGGCACAGCAAAGGGATTGGCTTATCTACATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGACTAGCAATATCCTCCTTGATGATAATCTTCACCCTAAAATTGCTGATTTTGGATTGGCGCGGCTTTTGCCAGGAGATCGTTCTCATTTAAGCACGGGATTTGCAGGAACATTGGGATACACAGCACCAGAGTATGCAATCCATGGTCAATTATCAGAAAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTTGAAATCATAAGCGGTCAGAAGAGTACCGAACTAAAGGCCGATGATGATGGTGAATACCTTCTTCAAAAGACATGGAAACTGCATGAGAGAGGCGTGCACTTGGAGCTTGTGGACAAGGTCTTAGACCCTAATGACTATGATGGAGAAGAAGTGAAGAAAGTGATAGAGATTGCTTTAATGTGTACTCAAGCATCAGCTGGAATGAGACCAACAATGTCTGAAGTAGTAGCCCTACTCCAAACCAAGAGCTTAGTGGAACACCTGCAACCAACTATGCCGGTGTTTGTAGAAACGAATCTTAGGACTCGAGAAGGCCACTCTACCTCAACTGGGGGATCTTCTACATCTAATGCTACTGCATCCATCTCTGTTCTATCGGCTCGATGA 1950 0.3867 MVLQLKLVFITLVCWNIVINYDCVVLGDSQTSIVLNNGCSTYNAPNLRSFYANINGTFLDLRNQISNQSKHFATSQQAIGEVIVYSMFQCRNYLSKNDCVGCFNIASTKIRNCSASNGARLIYDGCFLRYESERFYDQTTQPGSGISCGNKTSKEGTAFETIGQKVLMDLQLATPKIKGFFAATKTQVTPSSNSSIYAIAQCVETATESSCLNCMTGGYNNLQTCLPNTDGRAYDAGCFMRYSETPFFADNQTIDITTYLNKGGSSNKWAIIGGVVGGVGLLVIILAILVWRRYRKPKRTPRGNILGATELKGPVNYKYSDLKAATKNFSDENKLGEGGFGDVYKGTLKNGNVVAVKKLVLGKSSKIDNDFESEVKLISNVHHRNLVRLLGCCSKNQERILVYEYMANSSLDKFLFGDKQGSLNWKQRCDIIFGTAKGLAYLHEEFHISIIHRDIKTSNILLDDNLHPKIADFGLARLLPGDRSHLSTGFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTELKADDDGEYLLQKTWKLHERGVHLELVDKVLDPNDYDGEEVKKVIEIALMCTQASAGMRPTMSEVVALLQTKSLVEHLQPTMPVFVETNLRTREGHSTSTGGSSTSNATASISVLSAR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3522 649 SUPERFAMILY Protein kinase-like (PK-like) 314 615 IPR011009 -
Tpr3g3522 649 MobiDBLite consensus disorder prediction 625 649 - -
Tpr3g3522 649 Pfam Salt stress response/antifungal 148 244 IPR002902 -
Tpr3g3522 649 Pfam Salt stress response/antifungal 39 132 IPR002902 -
Tpr3g3522 649 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
Tpr3g3522 649 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Tpr3g3522 649 ProSiteProfiles Protein kinase domain profile. 329 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3522 649 Pfam Protein tyrosine and serine/threonine kinase 332 599 IPR001245 GO:0004672|GO:0006468
Tpr3g3522 649 Gene3D - 31 135 IPR038408 -
Tpr3g3522 649 Gene3D - 144 247 IPR038408 -
Tpr3g3522 649 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 643 - -
Tpr3g3522 649 SMART serkin_6 329 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3522 649 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 643 - -
Tpr3g3522 649 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Tpr3g3522 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Tpr3g3522 649 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Tpr3g3522 649 CDD STKc_IRAK 335 601 - -
Tpr3g3522 649 Gene3D Phosphorylase Kinase; domain 1 298 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3522 Tpr-Chr3 39068435 39075815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3522 25 649 Receptor kinase-like Gene Family AT1G70520 37.147 1.32e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g3522 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3522 - - gmx:100801131 904.82