Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3491 ATGGGTTGTATATGTTCCAAGAGTTCAGCTGTAGAAGACAACAATGAAAGTATATCAAAGAAATTGCAATCAATTAGCACAAGAACTTCAGAGTTGAATGTTTTGAGGTTGAATTCTTCGAAGAGAGTTGAGGGTGGAAGTGATGTGAAAGTGAAAGCTTCATTGAATGAAAAGAAATCCAATGGTTCGGTGCACTTGTATGATGATAAAAATGGTAGGAAGAAGAAAATTGAGAAGACTGAATTTACTGTTATTGATCGTCCTGGTCTTGGAAAGGTTCCAAAGGCTATAGAAGGTGAACAAGTTGCAGCTGGTTGGCCGGGGTGGCTTTCTTCTGTTGCTGGTGATGCTATCAGAGGATGGATACCGCGAAGTGCAGATACTTTTGAGAGGTTACATAAAATCGGGCAAGGAACTTACAGTACTGTTTATAAGGCACGTGACGTGACTAATCAAAAGATTGTTGCATTGAAGAAGGTGCGGTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATACATATTCTGCGTAGGCTCGACCATCCAAACATAATCAAATTGGAGGGCTTGATAACATCAGAAACATCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAACATGACCTAACAGGACTTGTATCAAATCCGAATATCAAATTCTCTGAACCACAGCTGAAGTGCTACATGCATCAACTTCTTAGTGGATTGGATCATTGTCATAGTCATGGTGTCCTCCACCGCGACATAAAGGGTTCAAATCTTCTCATCGACAATAATGGTGTTTTAAAGATTGCCGATTTTGGTTTGGCAAATGTTTTTGACTCCCATCACAATATTCCATTGACTAGCCGTGTAGTAACTCTGTGGTACAGACCACCTGAACTTTTACTTGGAGCCAATCATTATGGGGTTGCAGTGGATTTATGGAGCACTGGTTGTATACTGGGGGAACTATATACAGGCCGGCCCATTTTGCCTGGAAAAACTGAGGTTGAGCAGTTGCATCGGATTTTTAAACTTTGCGGCTCACCGTCTGAAGACTATTGGGGTAAGTTGCGGTTGCCACATTCGACAGTATTCAAGCCTCCACACCATTATAGGCGATGTGTTGCGGATACGTTTAAGGATTATTCATCAACTGCTCTTAAGCTTATAGAGACCCTACTTTCTGTAGATCCGTCACAACGAGGGACAGCAGCTGCTGCTCTGAAAAGTGAGTTCTTCACATCAGAACCTTTGCCTTGTGATCCATCAAGTTTACCAAAATATCCTCCTAGCAAGGAGATTGACGCTAAAATGCGTGATGAAGCAACCAGAAGGCAAGGAGCTGTTGGAGAGAGGGAGCAAAAAGTTGGCTCAGCGGTTAGACAAGAAAAAGGACCTAGGGCCGTTGTCTCAACAAAAGACAACGCTGACTTGGGCGCATCAATACAGCAAGTCAAACATCATTCCATCTCAAAGAACCGAAACGAATTGTCGTATCCTCATAGAGAACACGTGTCCGGGACTGAAGGTTTCCCACACAGACAATCAGATGTTAGAGAAACAGAAAATAATATATCTGGCCACTTTTATAGGAGGCCTTCACATTCAGGCCCATTGGTTCCTGGTTCTGGCTGGCCCAGAGGCGTGAAGGAAGTTGATAATGGGCCACCTGTTTCAAACAGAGTGAACCTAGCAAAACTATCCGGGCTTGTAGCATCTAGGACTTTGTTGTCCGAAGATCAGGAGCCAAAACCAGTTCCCTTTCTCCACAGAAAACCAATTGAAGTAAGAAAATCCGTAGAGGCGGCTAATGGATCCGAGTCAAGAAGAAGGCGGGATAAGAAACGAATTGTTGATCACAGTCAAATTGTAAATAGAAGAGTCCCAACCGAAAAATCAACTCCGGATGGACATGGATCCAGCGGAAACAAGATATACATGTCTGGTCCGTTACTGGCTTCAAACAATATGGATCAGATGCTCAAAGACCACGATCGTAAGATCCAAGAGTTTTCAAGACGAGCAAGAGGCTCTATAAACCGAACTCAAAGCCATTGCTATTTCCAGAAAGATGGTCAGCCTAATATAACAAGTGGCATCTTTCTGGTTTAA 2112 0.4285 MGCICSKSSAVEDNNESISKKLQSISTRTSELNVLRLNSSKRVEGGSDVKVKASLNEKKSNGSVHLYDDKNGRKKKIEKTEFTVIDRPGLGKVPKAIEGEQVAAGWPGWLSSVAGDAIRGWIPRSADTFERLHKIGQGTYSTVYKARDVTNQKIVALKKVRFDNLDPESVKFMAREIHILRRLDHPNIIKLEGLITSETSRSLYLVFEYMEHDLTGLVSNPNIKFSEPQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLANVFDSHHNIPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWGKLRLPHSTVFKPPHHYRRCVADTFKDYSSTALKLIETLLSVDPSQRGTAAAALKSEFFTSEPLPCDPSSLPKYPPSKEIDAKMRDEATRRQGAVGEREQKVGSAVRQEKGPRAVVSTKDNADLGASIQQVKHHSISKNRNELSYPHREHVSGTEGFPHRQSDVRETENNISGHFYRRPSHSGPLVPGSGWPRGVKEVDNGPPVSNRVNLAKLSGLVASRTLLSEDQEPKPVPFLHRKPIEVRKSVEAANGSESRRRRDKKRIVDHSQIVNRRVPTEKSTPDGHGSSGNKIYMSGPLLASNNMDQMLKDHDRKIQEFSRRARGSINRTQSHCYFQKDGQPNITSGIFLV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3491 703 MobiDBLite consensus disorder prediction 445 469 - -
Tpr3g3491 703 MobiDBLite consensus disorder prediction 599 626 - -
Tpr3g3491 703 PANTHER CYCLIN-DEPENDENT KINASE 32 680 - -
Tpr3g3491 703 Gene3D Phosphorylase Kinase; domain 1 116 211 - -
Tpr3g3491 703 Pfam Protein kinase domain 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3491 703 PANTHER CELL DIVISION PROTEIN KINASE 32 680 - -
Tpr3g3491 703 MobiDBLite consensus disorder prediction 599 643 - -
Tpr3g3491 703 MobiDBLite consensus disorder prediction 445 460 - -
Tpr3g3491 703 ProSiteProfiles Protein kinase domain profile. 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3491 703 SUPERFAMILY Protein kinase-like (PK-like) 122 421 IPR011009 -
Tpr3g3491 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Tpr3g3491 703 Gene3D Transferase(Phosphotransferase) domain 1 212 451 - -
Tpr3g3491 703 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Tpr3g3491 703 CDD STKc_CDK9_like 129 413 - -
Tpr3g3491 703 SMART serkin_6 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3491 Tpr-Chr3 38623279 38628184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3491 121 454 Core Cell Cycle Gene Families AT5G10270 49.714 2.08e-114 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr3g3491 Pkinase 3.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3491 - - gmx:100807590 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3491 3 38623279 38628184 Tpr3g3491 3 38623279 38628184 ECH