Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3484 ATGGGAGGTAGAGGAGGTATTATCAATGAAGAAGAAAACAAATGGCCACCATGGTTACAACCACTTCTTCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCACACAAGAGTGAATGTAACATGTTTTGTTTGGATTGTGTTAATGGAGCCCTTTGTTCTGCTTGTCTTGTTTCTCACAAACAACATAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTTTCTGAGATACAGAAATTTCTGGACATAACAGAAGTTCAAACCTATGTTATAAACAGCGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGAGTCACCAATACCTGCCAAGTTTGTGACCGTAGCCTCCTTGATTCTTTCAACTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTGAGGAAGAATAAAATGTTAATTCAGAAAGATGGGTCTGATGGTGAAGAGTCAATGAATGGTATTAGCACTGGAAGTGGAAGAAACAAAATTCATAGCTTTACACCTTCAACACCACCTCCAACAGTTGTGAATTACAGAACAGTGAAGAGAAGGAAAGGAGTTCCACATAGAGCTCCAATGGGAGGAGGAATCATTATAGAATACTGA 654 0.393 MGGRGGIINEEENKWPPWLQPLLQTSFFVQCKVHSDSHKSECNMFCLDCVNGALCSACLVSHKQHRTIQIRRSSYHDVIRVSEIQKFLDITEVQTYVINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFNFCSLGCKIVGTSKKLRKNKMLIQKDGSDGEESMNGISTGSGRNKIHSFTPSTPPPTVVNYRTVKRRKGVPHRAPMGGGIIIEY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3484 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 212 - -
Tpr3g3484 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 212 - -
Tpr3g3484 217 Pfam PLATZ transcription factor 71 142 IPR006734 -
Tpr3g3484 217 CDD Bbox2 31 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3484 Tpr-Chr3 38518937 38521432 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr3g3484 PLATZ 2.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3484 - - gmx:100796834 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3484 3 38518937 38521432 Tpr2g4027 2 42636799 42640247 ECH
Tpr3g3484 3 38518937 38521432 Tpr3g3484 3 38518937 38521432 ECH