Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3483 ATGAAAGATCTTTGTAGAAATTTCCAGCGAGGCAGCTGTCAATATGGAGACAGGTGTAGATTCGTTCATCAACAACAGCGAAAATCTAATAATGCCTTTGGAGGACAGCAAAATACAACTAACAACCCTTTTGGATTTGGCTCTGCTTCTCCTTCTGCTTCTGCCCCCAACAACAACAACCCTTTTGGTTTTGGAACTCAAAACACCTCCCACTTAAATGCCCCTCCTCGTTCTGATTCCAAACCTAACCAATTTCAGCCTTTTGAAAACAAATGGACTCGATCTTCATCCAAACCACAGAATGGCCCTCCACGCCAGTCAGATAACAATTCACAAGCAGTGAATCATAAATGCACAGATCCTGAGGTTTGCAAGCGCCAGATTGTAGAAGATTTTCAGCAAGAGAAACCACTTTGGATACTTACATGCTATGGTCATTGCAAAGGTGCTCCTTGTGACATTCTTGGAGATATTAGCTATGAAGAATTACGAGCAGCGGCTTATGAGGATGCCAGGAATGGAACGAGTTTGCCAGTAATTGTTGAGAAAGAGAGAACAATACTAAAATCCAAGTTGGTTGAGTTTGACAAACTACTTTCTGAACCCTACAAAATGCCTCTGAATTCTTCTCTTGGAGCCAATGCGAATACATTTTCACCAGCCACTCAAAACTACCAATCTAATGGAGCCAATGCAAATACATTTTCACCAGCCACTCAAAATTACCAATCTAATGGAGCCAATGTAAATGCATTTTCACCAGCCACTCAAAATTACCAAGCTAATGGAGCCAATGCAAATGCATTTTTACCAGCCACTCAAAACAATGGTCCTTTAGCAGTCTCAAGCTTTAGCCAACTTGGCGCTTCACTGAACACTGGTTTTGAAAGGCCCTCTGGACCACAAATGACCACTCCAGCGCAGCCTAGCACGACCTTTGGAAATGGAGGAAACATTTTCGGATCCAACACTCAAAATATATTCGGCAGTGGAATCTCAGGTGCTCAAAGCAACCCCTTTTCTACACCAGTGGAGTTTACAATGTTTCCAGGTTCAACTTCACAGTTCCAACAACCATCCACTGCGTTCAATAACACTAGCTCCACTACAATGCTTCCAACATCAGCTGTTCAGCTAAACACGTCCCAAGTAGAGAATGTGTCCGTAGATGAAAGTGTCTGGTTAAAGGAGAAATGGGATCCTGGAGAGATTCCAGAAGTAGCTCCTCCGGATAGATTTATTCAGGATGTGATTGGATTGCAGAGTATAATCAACTGA 1278 0.4264 MKDLCRNFQRGSCQYGDRCRFVHQQQRKSNNAFGGQQNTTNNPFGFGSASPSASAPNNNNPFGFGTQNTSHLNAPPRSDSKPNQFQPFENKWTRSSSKPQNGPPRQSDNNSQAVNHKCTDPEVCKRQIVEDFQQEKPLWILTCYGHCKGAPCDILGDISYEELRAAAYEDARNGTSLPVIVEKERTILKSKLVEFDKLLSEPYKMPLNSSLGANANTFSPATQNYQSNGANANTFSPATQNYQSNGANVNAFSPATQNYQANGANANAFLPATQNNGPLAVSSFSQLGASLNTGFERPSGPQMTTPAQPSTTFGNGGNIFGSNTQNIFGSGISGAQSNPFSTPVEFTMFPGSTSQFQQPSTAFNNTSSTTMLPTSAVQLNTSQVENVSVDESVWLKEKWDPGEIPEVAPPDRFIQDVIGLQSIIN* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3483 425 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 3 23 IPR000571 GO:0046872
Tpr3g3483 425 SMART c3hfinal6 2 25 IPR000571 GO:0046872
Tpr3g3483 425 MobiDBLite consensus disorder prediction 91 115 - -
Tpr3g3483 425 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 250 - -
Tpr3g3483 425 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 249 413 - -
Tpr3g3483 425 Gene3D - 1 58 - -
Tpr3g3483 425 SUPERFAMILY CCCH zinc finger 3 26 IPR036855 GO:0046872
Tpr3g3483 425 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Tpr3g3483 425 PANTHER MAKORIN-RELATED 2 250 IPR045072 -
Tpr3g3483 425 PANTHER MAKORIN-RELATED 249 413 IPR045072 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr3g3483 zf-CCCH 4e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3483 K14321 - gmx:100814339 442.195