Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3434 ATGACTCCAACTGCAACTAAGAAATCTTTTTCTTCTTGTTCGGATCAAGGTAGTGGTAAGGGACAATCGATTAAGCAACGTAGACTTACAAGACAGAGGAGATTATGTTATCCTAGTGATAATAATAATAATAATAATCAAGATTGTGAATCTTTTCATTCTAACGAAGCTGTTTCTTTTTCGTTACCGTCTTCTCCTTTACGAACTAGTTCTGATCATTGGTCTTCTTCTGCTGTTCCTCAACCTCTTCCTCTTCCTGAGTCGCCGTTGACTCGACATCATCATGCTGCTGCTTTACCCTTTTCCAGAAAGACGGTGGATCATGATGCTGTGAGAAGCTTAAGGTCTTCTAGCAATTTGAGTAAATCCTCTTTTGACATGGTGAATGGAAATGCAAATTCTGATTTGAGAGTGAATATTCCACCTGCTAGAGGTTTGGTGTCAAGCCATAGTTCTTGTAAAGATACTGGAAAACACTCACATGATAATGACTGCGAAGGTATTTCCAACACAAAATTGCAATTTGCTACCAAGAGTGCCCCAACAAGCATATTCTCCAGTCCTGTTACTAGTCCACGCAGATTAAGCAATGTAGATTTATTTGATCCTTCCATCAATTTTCCTCAAGATTTTAATGACATTTTGAGATTGCCTGCTAAAACTGCTCGTAGTCCAGACTTGTCTCCTCGTCGTAGCTTGGGGAACCACAGTCCTATTCACCGTCACACTATTCAAGGGGGAGCTCCTTCTCACCACTCTAAACATTATTCCAGAGTGTCTCCTGAATATAACCATGTTGATGCACATCCATTGCCCCTTCCACCGAGAGCTTCACCGCCGCGACAACAATCACCTGCACAGCATCAATCAAATGTCACGTTAAGTCACTCAACAGAAATTTTTCATTCAATGAAGGGTCAATGGCAGAAAGGAAAACTTATTGGACGAGGATCATTTGGAAGTGTTTATCAGGCAACAAACCTAGAGACTGGAGCCTCATGTGCACTGAAAGAGGTCGATCTGTTTCCTGATGATCCTAAATCTGCTGACTGCATGAAGCAGCTAGACCAGGAAATCAGAATTCTTGGTCAACTACACCACCCCAACATTGTTCAATATTATGGCAGTGAAATAGTTGGTGATCAATTGTGCATATATATGGAATATGTCCATCCTGGATCACTAACTAAGTTTATGCATGAGCATTGTGGGGCTATGACAGAATCTGTGGTTCGCAATTTTACGCGGCATATTCTCTCTGGATTGGCGTACTTACATAGCACCAAGACTATCCACAGGGACATTAAAGGTGCAAACTTGCTGGTTGATGCATCAGGCATAGTCAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCGCTGAAAGGAAGTCCATACTGGATGGCTCCTGAGCTCATGATGGCTGCCATGAAGAACGAAACCAATCCCAACGTCGCAATGGCTGTCGATATATGGAGCTTAGGATGCACCATCATTGAAATGCTGACAGGAAAACCCCCTTGGAGCGAGTTTCCAGGGCATCAAGCCATGTTCAAGGTACTGCACAGATCCCCGGACATACCCAAAACTTTATCCCCAGAAGGACAGGATTTCCTTGAGCAGTGTTTTCGAAGGAATCCTGCAGAACGACCATCTGCAGCGGTGCTTCTGACACATGCCTTTGTGCAAAATTTGCATGATCAAGATATTATAGTTCATTCACAAGTCTGTCATAAAGAAGACACCATAGTTCATTCACAAGGATTTCATAAAGAAGACACTGGACCCAAAGATGAACCGCGTAAACACAGTCCAGGACACAGTTCAAAACATAGCCGTGGTGTAGGGCCAGCTTCCTTTCGTGCACGAATTTTTTGCAAAATTCAAAATTTAATCGGTGACACTTCCAAAAAAGCTGATACCGAGGAATCTAATCACATTAGATCTTCTCCTGTATCTCCTTGCTCGCTGACTGAAGTTAACAGTCCTCAATCTCCCTTTAATCCTAATAACCGCAATTGCATGACCGTTTCCAAACCCTCCAACATACCCTTCACGATTATGAGAATTGTGAAGCAGCTATGA 2106 0.4236 MTPTATKKSFSSCSDQGSGKGQSIKQRRLTRQRRLCYPSDNNNNNNQDCESFHSNEAVSFSLPSSPLRTSSDHWSSSAVPQPLPLPESPLTRHHHAAALPFSRKTVDHDAVRSLRSSSNLSKSSFDMVNGNANSDLRVNIPPARGLVSSHSSCKDTGKHSHDNDCEGISNTKLQFATKSAPTSIFSSPVTSPRRLSNVDLFDPSINFPQDFNDILRLPAKTARSPDLSPRRSLGNHSPIHRHTIQGGAPSHHSKHYSRVSPEYNHVDAHPLPLPPRASPPRQQSPAQHQSNVTLSHSTEIFHSMKGQWQKGKLIGRGSFGSVYQATNLETGASCALKEVDLFPDDPKSADCMKQLDQEIRILGQLHHPNIVQYYGSEIVGDQLCIYMEYVHPGSLTKFMHEHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMAAMKNETNPNVAMAVDIWSLGCTIIEMLTGKPPWSEFPGHQAMFKVLHRSPDIPKTLSPEGQDFLEQCFRRNPAERPSAAVLLTHAFVQNLHDQDIIVHSQVCHKEDTIVHSQGFHKEDTGPKDEPRKHSPGHSSKHSRGVGPASFRARIFCKIQNLIGDTSKKADTEESNHIRSSPVSPCSLTEVNSPQSPFNPNNRNCMTVSKPSNIPFTIMRIVKQL* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3434 701 MobiDBLite consensus disorder prediction 653 675 - -
Tpr3g3434 701 MobiDBLite consensus disorder prediction 594 612 - -
Tpr3g3434 701 MobiDBLite consensus disorder prediction 1 42 - -
Tpr3g3434 701 SMART serkin_6 308 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3434 701 MobiDBLite consensus disorder prediction 1 25 - -
Tpr3g3434 701 ProSitePatterns Protein kinases ATP-binding region signature. 314 337 IPR017441 GO:0005524
Tpr3g3434 701 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 6 695 - -
Tpr3g3434 701 MobiDBLite consensus disorder prediction 643 675 - -
Tpr3g3434 701 MobiDBLite consensus disorder prediction 594 622 - -
Tpr3g3434 701 Pfam Protein kinase domain 309 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3434 701 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 6 695 - -
Tpr3g3434 701 SUPERFAMILY Protein kinase-like (PK-like) 288 581 IPR011009 -
Tpr3g3434 701 Gene3D Transferase(Phosphotransferase) domain 1 305 608 - -
Tpr3g3434 701 ProSiteProfiles Protein kinase domain profile. 308 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3434 Tpr-Chr3 37885290 37891341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3434 173 571 MAP Kinase Kinase Kinase AT5G66850 54.358 2.31e-148 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr3g3434 Pkinase 2.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3434 - - gmx:100781764 840.876