Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3423 ATGCAAGCCCCAGGCTGCTTTCTCTTGTTCTCATTTGTCTTCTTTTCATCAACATCAATTTTATCCCATGCACTTTCACATGAAGAAGCTTCTTTTATTGCCCGTCGTCAATTGTTACACCTTCAAGAAAGCGAGGATTTACCTGAAAATTTCGCAGATAACTATACAACAAATTTAACTTTTCCTCATCCTGGAATCAAAAGTGCTTACATAGCACTTCAAGCATGGAAAAATGCAATTTATTCAGACCCATCAAATGTTACGATGAATTGGGTGGGTCCTGATGTATGTTCTTACCAGGGAATTTTTTGTGCACCTTCTCTTAATGATTCAAAAGTTCAAGTTGTAGCTGGAATTGATCTTAATAATGCAGACATTGCAGGTTATATTCCTTCAGAGTTTGGTTTGTTGACTGATCTTGCTCTTTTTCATATAAACACAAATAGATTTTGCGGTATTATCCCAAAAAGCTTCTCCAGGTTAAAGCTTTTGTACGAGATGGATATTAGTAACAATCGCTTTGTTGGAAGATTTCCTACACCTGTTCTTTCAATTCCTGATATCAAATACCTTGATATCAGGTACAATGAATTTGAAGGAGAAATTCCTTCCGAGCTTTTCAATAAACCACTCGACGCTATATTTATGAATAACAATAGATTCACATCAACAATTCCAGATAATTTGGGAAATTCTCCTGCATCAGTTGTTGTTTTGGCCAATAACCATCTTAGTGGGTGTATTCCTGGAAGCATCGGTGAGATGAAACATACATTGAATGAAATTGTTTTAATCAACAACAATCTCACCGGTTGTTTGCCTTCAGAAATGGGAAAGCTTGAACAAGTCACTGTTTTTGACGTGAGTCAAAATTTGTTTGTCGGTATGTTGCCAAAGACATGTAAGGGACTCAAGAAAGTGGAAATTTTGTCTATTGCACATAACAAACTAACAGGTTTTGTTCCAAAAAATATCTGTAGTTTGTCTAATTTGGGGAACTTTACATTCTCAAATAACTATTTCAATGGTGAGGAAGAAGGTTGTGTGCCTCCTGGAAAAGACATTTTGTTGGATGATAGTTATAATTGTGTACCTGACAGACCAAAACAAAAGACAGCAAATGATTGCAATGTTGTTATAAGCAAACCTGTTGATTGTAGCAAGGCACAATGTACTAAAGGTAGCCAATCTCACTCACATTCCCCACCAAGTGATCAACATCAAACACCAACACCTTATGTTCCAAAGCCAGAGCCAAAACCTTCAACTCCTTCAAATCCTCCAAGCGAGAACCCAACGCCTTCGGTGCCAAAGCCACAACCACAACCTACCCCATCTCCCTCAAAGCCACAACCCAAACCTACACCTACACCTTCCAACCCCTCACCAAAGCCAACACCATCAACACCAAAGCCAACACCTACACCTTCCAAATCTTCACCAAAGCCAACACCGTCAACACCAAATCCAAAGCCAACACCTACACCTTCAACACCAAGTGAGAAGCCACAATCCAAACCAACCCCATCACCATCCAATCCCACACCAAATGAGAAGCCTACACCAAAGCCACAACCCAAACCAACTCCAACTCCATCCAATCCACCCCCAAGTGAGAAGCCTACACCAAAGCCACAACCAAAACCAACTCCAACCCCGTCCAATCCACCACCAAGTGAGAAGCCTACACCAAAGCCACAGCCAAAACAAACTCCAACTCCGTCATCACCATCCAATCCACCATCAAGTGATAAGCCAAAACCAAAACCACCACAAACCCCTCCCACACCTCAAGCAGAACCATCTGAAGAAGATGAGGGTCCTATCAGACAAGCACCTAAAACAAAGAATACAAGATCTCCTCCCCCACCAATTCAATCCCCGCCACCACCAGTCCTCTCACCACCACCGCCACTAGTTCACTCACCACCACCTCCTGTTCATTCACCACCTCCACCGGTACACTCCCCACCACCTCCTGTTAATTCACCTCCTCCACCAGTTCACTCCCCACCTCCACCGGTACATTCTCCTCCTCCTCCCATCCACTCTCCACCACCCCCGATTAGATCCCCACCACCACCTGTTTACTCCCCACCACCACCTGTTCACTCTCCTCCTCCGCCAGTTCACTCTCCACCCCCGCCTGTTCAGTCTCCACCACCACCAATTTTCTCACCGCCACCACCGGTCTACTCTCCACCTCCACCTACTGCATCACCACCTCCTGTTTATGCACCACCTCCAGGAGATGATGATATTGTTCTTCCCCCTCACTTTGGTTCTTCGTATGCTTCACCCCCTCCACCAATCATTGCTGGATACTAA 2328 0.439 MQAPGCFLLFSFVFFSSTSILSHALSHEEASFIARRQLLHLQESEDLPENFADNYTTNLTFPHPGIKSAYIALQAWKNAIYSDPSNVTMNWVGPDVCSYQGIFCAPSLNDSKVQVVAGIDLNNADIAGYIPSEFGLLTDLALFHINTNRFCGIIPKSFSRLKLLYEMDISNNRFVGRFPTPVLSIPDIKYLDIRYNEFEGEIPSELFNKPLDAIFMNNNRFTSTIPDNLGNSPASVVVLANNHLSGCIPGSIGEMKHTLNEIVLINNNLTGCLPSEMGKLEQVTVFDVSQNLFVGMLPKTCKGLKKVEILSIAHNKLTGFVPKNICSLSNLGNFTFSNNYFNGEEEGCVPPGKDILLDDSYNCVPDRPKQKTANDCNVVISKPVDCSKAQCTKGSQSHSHSPPSDQHQTPTPYVPKPEPKPSTPSNPPSENPTPSVPKPQPQPTPSPSKPQPKPTPTPSNPSPKPTPSTPKPTPTPSKSSPKPTPSTPNPKPTPTPSTPSEKPQSKPTPSPSNPTPNEKPTPKPQPKPTPTPSNPPPSEKPTPKPQPKPTPTPSNPPPSEKPTPKPQPKQTPTPSSPSNPPSSDKPKPKPPQTPPTPQAEPSEEDEGPIRQAPKTKNTRSPPPPIQSPPPPVLSPPPPLVHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPPPPVHSPPPPIHSPPPPIRSPPPPVYSPPPPVHSPPPPVHSPPPPVQSPPPPIFSPPPPVYSPPPPTASPPPVYAPPPGDDDIVLPPHFGSSYASPPPPIIAGY* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3423 775 MobiDBLite consensus disorder prediction 389 407 - -
Tpr3g3423 775 MobiDBLite consensus disorder prediction 389 775 - -
Tpr3g3423 775 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 665 770 - -
Tpr3g3423 775 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 3 602 - -
Tpr3g3423 775 PRINTS Proline rich extensin signature 409 421 - -
Tpr3g3423 775 PRINTS Proline rich extensin signature 427 443 - -
Tpr3g3423 775 PRINTS Proline rich extensin signature 447 459 - -
Tpr3g3423 775 PRINTS Proline rich extensin signature 463 484 - -
Tpr3g3423 775 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 665 770 - -
Tpr3g3423 775 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 3 602 - -
Tpr3g3423 775 MobiDBLite consensus disorder prediction 617 754 - -
Tpr3g3423 775 MobiDBLite consensus disorder prediction 408 598 - -
Tpr3g3423 775 Gene3D Ribonuclease Inhibitor 68 350 IPR032675 -
Tpr3g3423 775 SUPERFAMILY L domain-like 69 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3423 Tpr-Chr3 37731324 37735451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3423 24 532 Trihelix Transcription Factor Family AT4G33970 52.437 4.13e-174 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3423 - - gmx:100780677 607.446