Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3415 ATGGCACCAAGTTTTGACTGTGTTAATAGTCTTCTTTGTACTGAGGAAGATAGCAGTGTTTTTGATGATGGTGAATATGGTGGCGGTGTTGATTCGATGGTGGAGGTTTATGAGGATTCGTGGCGTCCTAGGTTGGACAACAATCAGAGGAATCAACAGCAACAAGGATTTGGTGATGTTCCTGATGAGTTGCCATTACAGAGTGAAGAGTGTTTGGTTCTGATGTTGGAAAAAGAGTTTCAACAATGGCCTGGTGTTGATTACTTGAATAGATTGCAATCTGGGGTTTTGGATGTTGGGGCAAGATATGAAGCCATCGATTGGATTCAAAAGGTTCAAGCATATTTTGGTTTCGGTCCTCTATGTGCCTATCTGTCCATTAATTATATGGATCGTTTCCTTGCTGGGTATGAATTACCGAAGGGAAGGGCTTGGACAATGCAATTGTTGGCTGTAGCCTGCATTTCTTTGGCAGCGAAAGTAGAGGAGACCAGTGTTCCTATGACTCTTGATTTGCAAATTGGTGAGTCTAAGTTTGTATTTGAAGCGAAAACCATTCAGAGAATGGAACTTCTAGTGCTAAGCACATTGAAGTGGAGAATGCAATCAATAACTCCTTTTTCCTTCATTGAATATTTCCTTTCTAAGATTACCGATAATGACGATAAGAGTTCATTAACGTCTTCAATTTCGCAATCTACTCAACTTATATCAAATACCATTAAAGGTATTGACTTCTTGGAATTCAAACCATCTGAAATTGCAGCAGCAGTGGCTACATGTGTTGTTGGGGAAACCCAAGCAATTGATACCAACAAATCAATTTCTACTCTGATTCAATACATAGAAAAGGAGAGATTAATGAAATGTATTGAAAAAGTCCAAGAGATGTTGTCAATGAACAGTGTTGTGACAGGCAAGGATTTAAGTGCTTCATCTTCTGTCCCTAATGTGCCACAAAGCCCAATAGGTGTGTTGGATACATTATGCTTCAGCCAGAAAAGTGATGACACAAATGTTGGTGTTGGTGTTGGTGGTGGTGGTGGTGGTTCATGTTCAACTTCACATATCAGTAGCCCAGATGCTAAGAGAAGAAAGCTAAACAAAACTTGTGGGACATAG 1122 0.3993 MAPSFDCVNSLLCTEEDSSVFDDGEYGGGVDSMVEVYEDSWRPRLDNNQRNQQQQGFGDVPDELPLQSEECLVLMLEKEFQQWPGVDYLNRLQSGVLDVGARYEAIDWIQKVQAYFGFGPLCAYLSINYMDRFLAGYELPKGRAWTMQLLAVACISLAAKVEETSVPMTLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQSITPFSFIEYFLSKITDNDDKSSLTSSISQSTQLISNTIKGIDFLEFKPSEIAAAVATCVVGETQAIDTNKSISTLIQYIEKERLMKCIEKVQEMLSMNSVVTGKDLSASSSVPNVPQSPIGVLDTLCFSQKSDDTNVGVGVGGGGGGSCSTSHISSPDAKRRKLNKTCGT* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3415 373 SUPERFAMILY Cyclin-like 186 299 IPR036915 -
Tpr3g3415 373 SMART Cyclin_C_2 204 332 IPR004367 -
Tpr3g3415 373 MobiDBLite consensus disorder prediction 359 373 - -
Tpr3g3415 373 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 365 - -
Tpr3g3415 373 Gene3D - 85 202 - -
Tpr3g3415 373 SMART cyclin_7 107 195 IPR013763 -
Tpr3g3415 373 CDD CYCLIN 102 194 IPR013763 -
Tpr3g3415 373 PANTHER CYCLINS 1 365 IPR039361 -
Tpr3g3415 373 SUPERFAMILY Cyclin-like 66 201 IPR036915 -
Tpr3g3415 373 Pfam Cyclin, C-terminal domain 204 302 IPR004367 -
Tpr3g3415 373 Gene3D - 75 293 - -
Tpr3g3415 373 MobiDBLite consensus disorder prediction 350 373 - -
Tpr3g3415 373 Pfam Cyclin, N-terminal domain 74 201 IPR006671 -
Tpr3g3415 373 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3415 Tpr-Chr3 37661137 37664118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3415 75 340 Core Cell Cycle Gene Families AT2G22490 49.446 6.35e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3415 K18810 - gmx:100803873 446.432