Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3413 ATGGGCTATCTTTTTTGCAATGCAGAATCTGCAATAGCTACTTGTGATCCTCACTATTGGGATCTCAAAAAAAGAAACAAATCAATAACAAACCGTACACACTCCATCAAAGAGTTTAATTACACCGACCTCGTCGCCGCTACTAACGGTTTCTCTGCTGAAAGCTACCTTGGTAAAGGTAGCCACGGCAGAGTATACCGTGCTACTTTAAACGGAGGCGATCTAATCGTCGCCGTTAAAACAACAAAGTTAACTACAAAAGCACTTCATAATCACAGCAACAATAACTGCACCGGTTGCGGTAACTGTACAAGTCCAGCTGAAAACGAGATCGAGATTCTCTCACAAGTTCCAAATCATCGTCTCGTGAATCTCATCGGTTACTGCACCGATCTTAACGGCAATAAATTAATTGTCGTTGAATATATGCCAAACGGTTCACTTCACGATCTATTACATTCTACAAATAAACCGCCCGGTTGGACCAAACGCTTCCGGTTCGCATTACAAGTTGCGAAAGCGGTTCGAACGTTACACGGTTCAAATCCACCGGTGATTCATCGTGATATTAAATCTTCCAATGTTTTAATCGATCGAGATTGGAAAGCGAGACTCGGTGATTTCGGTCTTGCTCTTAGAGGACACGTGGAGGATGTTCGTGTTAAGTGTACACCACCGGCGGGGACGTTAGGGTATCTTGATCCATGCTATCTTGCGCCGGAGGATCTTAGTGCGAAAAGTGATGTGTTCAGTTTCGGGATCTTGTTGTTGGAGATAATCAGTGGAAGAAATGCTATTGATGTTAATTATAGTCCTCCGTCGGTTGTTGATTGGGCGGTGCCGTTGATTAGGCGAGGTGATTTCGTCGGGATCTGTGATCGGAGAATTGGAACGCCGTCGGATATGGCGGTGATGAGGCAGATTGCTGTGATTGCAGCGAGATGTGTTAGATCGACGGCGGAGAAACGGCCGGGGATGGTGGAGGTTGTGGAGTGTCTTAAATTGGCGAGGAAGAGGATTCATTCGTCGCCGATTTGGAGTAGTTTGAGACGGCGCGTGACGCGTGTGGAAAGCGCGCAACCGTTGATGAGTTGGGAAGAAGCTTATGATCATGATTATGATTATAATTATGATTATCATCATCATTATAATTATGATTGGGATGATAATAAGAGTGAGGAAGTTGTGAAGATTGTAAAGAGTGGAAGCAGTAGAAGAAAGAGTAAAGTATCAAGTGTAGCGAGTGTAGAGTATGAGAGTAAACCCTCCAAAAAAGGAACGAGATCTAAGCCGTCGAAAAGAATAACAAGATCTAAGACCGTTGGTTCTTCTTCTATTTGTGTTGGTAGTTGTAGTAGAAAGAGTGGGATTCAAATGGTTTCAGAGAAAACGGGTGTAATGAAGTTAAAAAAGTCAAAGTCAACGGGAGTCTTGCAAGGTCCTCTACTTTTGCATCAGAAGAAGAATGATGTAATTCATTCCGCTGAGTCTGAGACGATAGCGTTAGCGATATCGAAGTTGGTTATTCTAGATAATAAGAAGTTCGAAAAAAAGATGCTCGAAAAACCGTTGGTTAACTCGTATGGTTGGGAGTCTGAATAA 1602 0.4313 MGYLFCNAESAIATCDPHYWDLKKRNKSITNRTHSIKEFNYTDLVAATNGFSAESYLGKGSHGRVYRATLNGGDLIVAVKTTKLTTKALHNHSNNNCTGCGNCTSPAENEIEILSQVPNHRLVNLIGYCTDLNGNKLIVVEYMPNGSLHDLLHSTNKPPGWTKRFRFALQVAKAVRTLHGSNPPVIHRDIKSSNVLIDRDWKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIRRGDFVGICDRRIGTPSDMAVMRQIAVIAARCVRSTAEKRPGMVEVVECLKLARKRIHSSPIWSSLRRRVTRVESAQPLMSWEEAYDHDYDYNYDYHHHYNYDWDDNKSEEVVKIVKSGSSRRKSKVSSVASVEYESKPSKKGTRSKPSKRITRSKTVGSSSICVGSCSRKSGIQMVSEKTGVMKLKKSKSTGVLQGPLLLHQKKNDVIHSAESETIALAISKLVILDNKKFEKKMLEKPLVNSYGWESE* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3413 533 PANTHER - 1 513 - -
Tpr3g3413 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Tpr3g3413 533 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Tpr3g3413 533 Pfam Protein tyrosine and serine/threonine kinase 54 333 IPR001245 GO:0004672|GO:0006468
Tpr3g3413 533 Gene3D Transferase(Phosphotransferase) domain 1 143 348 - -
Tpr3g3413 533 ProSiteProfiles Protein kinase domain profile. 51 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3413 533 SMART serkin_6 51 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3413 533 SUPERFAMILY Protein kinase-like (PK-like) 26 342 IPR011009 -
Tpr3g3413 533 Gene3D Phosphorylase Kinase; domain 1 35 142 - -
Tpr3g3413 533 MobiDBLite consensus disorder prediction 410 441 - -
Tpr3g3413 533 PANTHER OS01G0750732 PROTEIN 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3413 Tpr-Chr3 37636970 37639063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3413 17 344 Receptor kinase-like Gene Family AT3G59420 40.240 1.04e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tpr3g3413 PK_Tyr_Ser-Thr 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3413 - - cam:101503747 766.918