Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3412 ATGGAATTTGAAGACCACGAAGAGGAAGAAGAAGAAGAAGAAATGGGATTCCCTGTTACGCCGGTAGCAGGTTACGACTCGCTAGGAAACTCAGGCGTCAGAACCAAAATGAGCGGCGGCGGTGGCGGTGGAGTCGACGGAGGTGAAACAACAACAACAACAGCCACCGCAGGTGGTCGCAAAAACGGACCCACCGGGACCGTTAGATACAGAGAATGTCAAAAGAATCATGCCGTTAGTATCGGAGGTCACGCCGTTGATGGTTGTTGTGAGTTTTTAGCAGCTGGAGAAGAAGGAACACTGGAAGCCGTAATTTGCGCTGCTTGTAACTGTCACCGGAATTTTCACCGTAAAGAGATCGACGGTGAAATCACTTCTCATAATCAACAAAGGTCATCTCATCATACTCAGTACCACCACAACCAGCACCCGCACCAGCACCATCAAATATCTCCTTACTACCACCGTGCAGCGTTACCTCCTCCGCCGGGGTACCACCACATGGTAACACCACCGCCGGTGTCACATCATCGGCCGTTAGCTCTTCCACCTGCTGCATCGAGTGGTGGATTCAGTAGAGAAGATGATGACGTGTCAATTCCGAGTAGCAGTGGTGGCGGTGGTGGTGGTGGTGGAAGTGGAATGAAGAAAAGGTTTAGAACAAAATTCACTCCGGAGCAGAAAGAAAAGATGCTTGCATTTGCGGATCAGATTGGATGGAGAATTCAGAAGGAAGATGAAGGTGCAATTGAACAATTCTGTGCTGAGAATTGTATTAAGAGAAATGTGCTTAAGGTTTGGATGCATAATAATAAGCACACTCGTGGTAAGAAACCCTAA 840 0.4833 MEFEDHEEEEEEEEMGFPVTPVAGYDSLGNSGVRTKMSGGGGGGVDGGETTTTTATAGGRKNGPTGTVRYRECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVICAACNCHRNFHRKEIDGEITSHNQQRSSHHTQYHHNQHPHQHHQISPYYHRAALPPPPGYHHMVTPPPVSHHRPLALPPAASSGGFSREDDDVSIPSSSGGGGGGGGSGMKKRFRTKFTPEQKEKMLAFADQIGWRIQKEDEGAIEQFCAENCIKRNVLKVWMHNNKHTRGKKP* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3412 279 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 216 272 IPR006455 -
Tpr3g3412 279 SUPERFAMILY Homeodomain-like 203 277 IPR009057 -
Tpr3g3412 279 MobiDBLite consensus disorder prediction 1 16 - -
Tpr3g3412 279 MobiDBLite consensus disorder prediction 187 216 - -
Tpr3g3412 279 MobiDBLite consensus disorder prediction 133 150 - -
Tpr3g3412 279 Gene3D - 202 277 - -
Tpr3g3412 279 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 69 120 IPR006456 -
Tpr3g3412 279 MobiDBLite consensus disorder prediction 38 63 - -
Tpr3g3412 279 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 31 204 - -
Tpr3g3412 279 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 197 278 - -
Tpr3g3412 279 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 197 278 - -
Tpr3g3412 279 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 31 204 - -
Tpr3g3412 279 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g3412 279 MobiDBLite consensus disorder prediction 47 61 - -
Tpr3g3412 279 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 119 IPR006456 -
Tpr3g3412 279 Pfam ZF-HD protein dimerisation region 68 120 IPR006456 -
Tpr3g3412 279 MobiDBLite consensus disorder prediction 126 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3412 Tpr-Chr3 37622320 37623622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3412 1 274 ZF-HD Transcription Factor Family AT4G24660 43.636 9.34e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Tpr3g3412 ZF-HD_dimer 2.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3412 - - gmx:100820567 337.806