Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3403 ATGAAAGGTGAATACGCAGAACAACAACAACAACATCAAAATCCAAACAAAGGAACCGAAACACCACCACCTTCATTACTATTCTCAAAACTTCACCAATCAAATTCTCAAAACAATTCATTATTTCATCCTTTTCAACTCTCTCATGAATGTCAAACAATCGGAGAAGACAGCACCGGCGGTGGCGGTGCTCAGAAACCGAACTCATCCGGCGATGGTGCGACAATCGAGGTTGTTAGACGACCTAGAGGACGTCCGCCTGGATCTAAAAACAGACCAAAACCGCCTATTATAATAACACGTGATTCAGAACCTGCTATGAGTCCTTTTATTCTAGAAGTTTCTGGTGGAAACGACGTCGTTGAAGCTATTTCACAGTTTAGTCGTCGTAAGAATATTGGTTTATGTGTTTTAACCGGTTCAGGAGCAGTTGCTAATGTTACCCTCCGTCAACCGTCAACTACACCTGGAACTACCGTTACTTTTCACGGTCGTTTTGATATTTTATCTGTAACCGCTACTTTTCTTCCTCAACAATCCGGTGGTGGTGGTGGTGGTTCGCCGGCTGTTCCGAGTGGATTCTCGATCTCGCTTGCTGGACCGCAAGGACAGATCGTTGGTGGAATTGTTGCTGGAAATTTGATAGCTGCGGGAACGGTTTTTATTATTGCTGCTTCGTTTAATAATCCTTCGTATTATAGGTTGCCTTTACAAGAAGAAGATGGAAACTCGGTGTCTGGCGGTGATGGCAATTCTCCGGCTGTTTCCGGTGCGGTGGATAGCGGTCAAGGCGGTGGTGATCAGTCGTGTGGGATGTCTATGTACAGCTGTCATATGCCATCATCTGATGTGATTTGGGCTCCATCTGCAAGACCACCACCTTACTGA 888 0.4527 MKGEYAEQQQQHQNPNKGTETPPPSLLFSKLHQSNSQNNSLFHPFQLSHECQTIGEDSTGGGGAQKPNSSGDGATIEVVRRPRGRPPGSKNRPKPPIIITRDSEPAMSPFILEVSGGNDVVEAISQFSRRKNIGLCVLTGSGAVANVTLRQPSTTPGTTVTFHGRFDILSVTATFLPQQSGGGGGGSPAVPSGFSISLAGPQGQIVGGIVAGNLIAAGTVFIIAASFNNPSYYRLPLQEEDGNSVSGGDGNSPAVSGAVDSGQGGGDQSCGMSMYSCHMPSSDVIWAPSARPPPY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3403 295 MobiDBLite consensus disorder prediction 1 72 - -
Tpr3g3403 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 294 IPR014476 GO:0003680
Tpr3g3403 295 CDD DUF296 109 227 IPR005175 -
Tpr3g3403 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 23 294 - -
Tpr3g3403 295 Gene3D - 108 245 - -
Tpr3g3403 295 ProSiteProfiles PPC domain profile profile. 104 248 IPR005175 -
Tpr3g3403 295 MobiDBLite consensus disorder prediction 1 96 - -
Tpr3g3403 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 106 241 - -
Tpr3g3403 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 109 229 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3403 Tpr-Chr3 37550389 37551896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3403 1 295 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 55.844 3.43e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3403 - - gmx:100788098 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3403 3 37550389 37551896 Tpr3g3403 3 37550389 37551896 ECH