Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3401 ATGGCAAGGCTTAGTTCTCATCACAATGGCAATAGCAATACCATACTATTTGTCTTCCCGTTCCTAGTATTATTACAGACACACTTTGTATCTGCAACATCTGAATCAAATATTGTGAAGTTCCTTCCTGGTTTTCAAGGACCTCTTCCTTTTCTACTAGAAACTGGATACATTGAAGTAAGTGAAACTGAAGCAGATGAGAATGCAGAAGTGTTTTACTATTTTATAGAATCTGAGAACAATCCTAAACAAGATCCTCTCTTGCTTTGGCTTACTGGTGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATAGGACCACTAACATTTATAAATGATGAATACAATGGGAGCTTACCAAATTTGGCCTTGAGGTCACTTTCATGGACAAAGGTTAGTAATATTATATTTTTGGATTTGCCTGCTGGGACTGGATTCTCATATCCCAAAACAGAAACTGCGGTTCAGCAAAGCACTTGGAAGCTAGCTCACAATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCATCCAAAATTTCTATCAAATGAAGTGTACATTGCTGGTGACTCATATTCAGGCATTCCTATCCCAATTATTGTTCAAGAAATTTCATATGGAAATGATGGTGGCCTCCAACCGTGGATAAACCTCCAGGGATACATATTGGGAAATCCCTTAACAACACCAAAAAATGATGATTACCAAATACCATTTAATCATGGCATGGCACTAATTTCTGATGAACTCTACCAGTCATTGAAAAAGAATTGTAGAGGCGAGTATAAACATATAGATCCCCAAAACGTATTTTGTTTGAAAGATTTCCAATCTTACACGGAGACTATTTCAGGAGTGTGTATTCCTCATATTTTGGAACCGAAATGCGAGACTGACTTTGTTGATAAAATTGAGATTCCTCGGAGGACACTTCTTATTGATAAAACTGATCACACCATTTTTAGTTCTTCTCTCACTATGCCACCTTTAAATTGTCGGACTCATGCATATTTCCTCAGTCCCTATTGGGCTAACGATGATAATGTTCGCAAAGCACTGCACATTCGAAAGGAAAGTATAGGAAAATGGAAGAGATGTAACGCGGACATACCTTTTAAGCATGAAACCCTTGACAGCTTTCCATATCATGCAAATCTTAGCAAAAAAGGCTTTCGTTCATTAATATACAGCGGTGATCATGACATGAAAGTTCCATTCTTGGCGACTCAAGCGTGGATAAGATCTTTAAATTACTCTATTGTTGATGATTGGAGGCCATGGTATTATAATGACCAAGTAGCAGGTTACACGAGGACTTACTCAAATCGAATGACATTTGCAACTGTGAAGGGGGGAGGACATACAGCTCCTGAATACAAACCTGAAGAATGCTTAGCCATGTTCACTAGGTGGATATCTAATAACTCACTTTAA 1440 0.3833 MARLSSHHNGNSNTILFVFPFLVLLQTHFVSATSESNIVKFLPGFQGPLPFLLETGYIEVSETEADENAEVFYYFIESENNPKQDPLLLWLTGGPGCSAFSGLVFEIGPLTFINDEYNGSLPNLALRSLSWTKVSNIIFLDLPAGTGFSYPKTETAVQQSTWKLAHNAHQFLRKWLIDHPKFLSNEVYIAGDSYSGIPIPIIVQEISYGNDGGLQPWINLQGYILGNPLTTPKNDDYQIPFNHGMALISDELYQSLKKNCRGEYKHIDPQNVFCLKDFQSYTETISGVCIPHILEPKCETDFVDKIEIPRRTLLIDKTDHTIFSSSLTMPPLNCRTHAYFLSPYWANDDNVRKALHIRKESIGKWKRCNADIPFKHETLDSFPYHANLSKKGFRSLIYSGDHDMKVPFLATQAWIRSLNYSIVDDWRPWYYNDQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECLAMFTRWISNNSL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3401 479 SUPERFAMILY alpha/beta-Hydrolases 39 476 IPR029058 -
Tpr3g3401 479 Gene3D alpha/beta hydrolase 49 479 IPR029058 -
Tpr3g3401 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 477 IPR001563 GO:0004185|GO:0006508
Tpr3g3401 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Tpr3g3401 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Tpr3g3401 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Tpr3g3401 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Tpr3g3401 479 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 15 477 - -
Tpr3g3401 479 Pfam Serine carboxypeptidase 43 476 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3401 Tpr-Chr3 37534943 37538790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3401 36 67 Calmodulin-binding Proteins AT2G22960 62.500 1.54e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3401 K16296 - gmx:100792006 637.491