Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3396 ATGGTGAGGTTTAGATGCTTCTTTAACATGCTCCTTATCCTCTTACACCTTGTGTTTGCAACATCTGAATCAAATATTGTGAAGTTCCTTCCTGGATTTCAAGGGCCACTTCCTTTTGTACTAGAAACTGGATACATTGAAGTAAGTGAAACTAAAGCAGATGAGAATGCAGAAGTGTTTTACTATTTTATTGAATCTGAGAACAATCCTAAAGAAGATCCTCTCTTGCTTTGGCTTACTGGTGGTCCTGGTTGCTCTGGCTTCTCTGGCCTTGCCTTTGAAATAGGTCCAATAACATTTACTATTAATGAGGAATACAATGGGAGCTTACCAAATTTGGTCTTGAGGCAACATTCATGGACAAAGGTGAGTAATATTATATTTTTGGATTTGCCTGCTGGAACTGGATTCTCATATCCCAAAACAGAAACTGCTGTTCAGCAAAGCACCTGGAAACTAGTTCAAAATGCTCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCAAAATTTCTATCAAATGAAGTGTACATTGCTGGTGACTCATACTCGGGCATTCCTGTCCCTATTATTGTTCAAGAAATTTCATATGGAAATGATGATGGTCTCCAACCGTGGATAAACCTCCAGGGATACATACTGGGAAATCCCTTAACAACACCAAAAAACAATGACTACCGAATACCATTTAATCATAGAATGGCACTAATTTCTGATGAACTCTACTTGTCACTGCAAAAGAATTGTAAAGGCAATTATATAAATATAGATCCCCAAAATGAACTTTGTCAGAGTGTCTTCCAATCCTACGAGGAGACTATTTCAAGAGTGTTCACACTTCATATTTTGGAACCAAAATGCGAATCTGATTATCATAAAGAAGTTCCTAGTAGGAGACATATTGATAAGGCTCACGAAATTTTTAGTTCTTCGCTCACAATGCCACCATCATGTCGGACTGATATACAGTTCCTCAGTCCCTATTGGGGTAACGATGATAATGTTCGCAAAGTACTGCACATTCGAAAGAGCCTTTTGCTTGTTGCTGTTCTTTGCAAGGAGTTGTAG 1068 0.382 MVRFRCFFNMLLILLHLVFATSESNIVKFLPGFQGPLPFVLETGYIEVSETKADENAEVFYYFIESENNPKEDPLLLWLTGGPGCSGFSGLAFEIGPITFTINEEYNGSLPNLVLRQHSWTKVSNIIFLDLPAGTGFSYPKTETAVQQSTWKLVQNAHQFLRKWLIDHPKFLSNEVYIAGDSYSGIPVPIIVQEISYGNDDGLQPWINLQGYILGNPLTTPKNNDYRIPFNHRMALISDELYLSLQKNCKGNYINIDPQNELCQSVFQSYEETISRVFTLHILEPKCESDYHKEVPSRRHIDKAHEIFSSSLTMPPSCRTDIQFLSPYWGNDDNVRKVLHIRKSLLLVAVLCKEL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3396 355 Pfam Serine carboxypeptidase 31 343 IPR001563 GO:0004185|GO:0006508
Tpr3g3396 355 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 347 IPR001563 GO:0004185|GO:0006508
Tpr3g3396 355 Gene3D alpha/beta hydrolase 19 297 IPR029058 -
Tpr3g3396 355 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Tpr3g3396 355 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Tpr3g3396 355 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Tpr3g3396 355 SUPERFAMILY alpha/beta-Hydrolases 27 342 IPR029058 -
Tpr3g3396 355 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 9 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3396 Tpr-Chr3 37476403 37484759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3396 24 55 Calmodulin-binding Proteins AT2G22960 62.500 6.94e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3396 K16296 - gmx:100801015 417.927