Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3395 ATGGCAACACTTAGTTCGTATTACAATGGCAATAACACTACTATGCTTATCTTTGCGTTCCTAGTAATAGTATTACAATCCACACATATTGTATTTGCAACATCTGAATCAAATATTGTGAAGTTCCTTCCTGGTTTTGAAGGGCCACTTCCTTTTGTACTAGAAACTGGATACATTGAAGTAAGTGAAACTGAAAGAGATGAGAATGCAGAAGTGTTTTACTATTTTATAGAATCTGAGAACAATCCTAAACAAGATCCTCTCTTGCTTTGGCTTACTGGTGGTCCTGGTTGCTCTGGCTTCTCTGGCCTTGTCTTTGAAATAGGTCCACTAGCATTTAAAAATGAGGTATACAATGGGAGCTTACCAAATTTGTTCTTGAGGCAACATTCATGGACAAAGGTGAGTAATATTATATTTTTGGATTTGCCTGCTGGAACTGGATTCTCATATCCCAAAACAGAAACTGCTGTTCAGCAAAGCACCTGGAAACTAGTTCAAAATGCTCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCAAAATTTCTATCAAATGAAGTGTACATTGCTGGTGACTCATACTCGGGCATTCCTGTCCCAATTATTGTTCAAGAAATTTCATATGAAAATGAAGGTGGCCTTCAACCGCGGATAAACCTCCAAGGATACATACTGGGAAATCCCATTACAACACCAAAAGATGATAATTACCAAATACCATTTAATCATGCTCATGCACTCATTTCTGATGAACTCTATCAGTCACTGCAAAAGAATTGTAAAGGTGAGTATACAAATATAGATCCCCAAAATGCACTTTGTCTGAGAGTCTTCCAATCCTACAAGGAGACTATTTCAGGAGTGTCCGGGATTCATATTTTGGAGCCGAAATGCGAATCTGATTTTCATACAGTTTCTAGTAGGAGACTTATTGATAAGGCTCGTGACATTTTTAGTTCTTCTCTCACAATGACACCTTTATATTGTCGGACTGATGCATATTTCCTCAGTCCCTATTGGGCTAACGACGATAATGTTCGCAAAGCACTGCACATTCGAAAGGGAAGTATAGGAAAATGGAAGCGATGTAACAACGACTTACCATTTAAGCATGAAACCCTTAACAGTTTTCCCTATCATGCAAATCTTAGCAAAAAAGGCTTTCGTTCATTAATATACAGCGGGGATCATGACATGAGAGTTCCATTCTTGGCGACTCAAGCGTGGATAAGATCTTTAAACTATTCCATTGTTGATGATTGGAGGCCATGGTATTCTAATGACCAAGTAGCAGGATACACGAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGGGGAGGACATACTGCTCCAGAGTACAAACCTGAAGAATGCTTAGGCATGTTGACTAGGTGGTTATCTAATAACCCACTCTAG 1428 0.3887 MATLSSYYNGNNTTMLIFAFLVIVLQSTHIVFATSESNIVKFLPGFEGPLPFVLETGYIEVSETERDENAEVFYYFIESENNPKQDPLLLWLTGGPGCSGFSGLVFEIGPLAFKNEVYNGSLPNLFLRQHSWTKVSNIIFLDLPAGTGFSYPKTETAVQQSTWKLVQNAHQFLRKWLIDHPKFLSNEVYIAGDSYSGIPVPIIVQEISYENEGGLQPRINLQGYILGNPITTPKDDNYQIPFNHAHALISDELYQSLQKNCKGEYTNIDPQNALCLRVFQSYKETISGVSGIHILEPKCESDFHTVSSRRLIDKARDIFSSSLTMTPLYCRTDAYFLSPYWANDDNVRKALHIRKGSIGKWKRCNNDLPFKHETLNSFPYHANLSKKGFRSLIYSGDHDMRVPFLATQAWIRSLNYSIVDDWRPWYSNDQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECLGMLTRWLSNNPL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3395 475 Pfam Serine carboxypeptidase 44 472 IPR001563 GO:0004185|GO:0006508
Tpr3g3395 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 473 IPR001563 GO:0004185|GO:0006508
Tpr3g3395 475 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 22 473 - -
Tpr3g3395 475 SUPERFAMILY alpha/beta-Hydrolases 40 474 IPR029058 -
Tpr3g3395 475 Gene3D alpha/beta hydrolase 49 475 IPR029058 -
Tpr3g3395 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Tpr3g3395 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Tpr3g3395 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Tpr3g3395 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3395 Tpr-Chr3 37450692 37454352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3395 38 63 Calmodulin-binding Proteins AT2G22960 76.923 1.10e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3395 K16296 - gmx:100792006 633.639