Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3390 ATGAACACAAGCAAAGCCGAAGCAGAACGATTATTAGAGATCGGAGAAGAACTTTTACAAAAACGCGATCTAAAAGGTTCACGAGAAATCGCAATTCTCGTTCAAGAAACCGAACCTCTTCTAGAAGGTTCCGATCAGATCTTAGCAATTGTCGATGTTCTTGAAGCAGCAGAAAAGCCATTGAATCTGAACAATCATCATCTCGATTGGTACGCAATTCTTCAAATCAATCGAAATTCACAAGATCTTAATCTTATCAAGAAACAGTATCGTACTCTTGCTCTTCTTCTTCATCCTGATAAGAATCCTTTTTCGTTTTCTGAACTTGCGTTTAAACTTGTTTCTGATGCTTGGGCCGTTTTATCTGATCCGGCCCAAAAGGCCCAATATGATAAAGGCTTTGAATTTGAACTTGAAGGTACTAATAATGGTTTAGGGAATGGAAATGGTAATGTGAGTTTTTGGACTGCATGTCCTTATTGTTATCATTTGTATGAGTATTCTAGGGTTTATGAAGGTTGTTGTTTGATGTGTCAGAAATGTGATAAATCTTTTCATGGTGTTTCGATTCGGTCTCTTCCGCCGATTGTGCCGGGACAAGAAGCTTATGAGGTTTCTTGGGGAATGTTTCCGATGGGTTTTGTTTTTGAAAGTTTGGGAAATGGTGGTGGTGATGTTGTTGTTGGTTCTGGTACGAGGAAGTCATAG 708 0.3898 MNTSKAEAERLLEIGEELLQKRDLKGSREIAILVQETEPLLEGSDQILAIVDVLEAAEKPLNLNNHHLDWYAILQINRNSQDLNLIKKQYRTLALLLHPDKNPFSFSELAFKLVSDAWAVLSDPAQKAQYDKGFEFELEGTNNGLGNGNGNVSFWTACPYCYHLYEYSRVYEGCCLMCQKCDKSFHGVSIRSLPPIVPGQEAYEVSWGMFPMGFVFESLGNGGGDVVVGSGTRKS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3390 235 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 217 - -
Tpr3g3390 235 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Tpr3g3390 235 SUPERFAMILY Chaperone J-domain 67 156 IPR036869 -
Tpr3g3390 235 Pfam DnaJ domain 69 131 IPR001623 -
Tpr3g3390 235 CDD DnaJ 69 123 IPR001623 -
Tpr3g3390 235 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Tpr3g3390 235 Gene3D DnaJ domain 55 146 IPR036869 -
Tpr3g3390 235 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 217 - -
Tpr3g3390 235 SMART dnaj_3 68 126 IPR001623 -
Tpr3g3390 235 PRINTS DnaJ domain signature 71 89 IPR001623 -
Tpr3g3390 235 PRINTS DnaJ domain signature 90 105 IPR001623 -
Tpr3g3390 235 PRINTS DnaJ domain signature 106 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3390 Tpr-Chr3 37396694 37398126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3390 2 232 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 51.452 6.63e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3390 - - mtr:MTR_3g100330 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2517 4 27280177 27281659 Tpr3g3390 3 37396694 37398126 PCT