Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3387 ATGAACTTGTGCTTCAAGTCTTCAATTTCAACAATGGTGTATCCAGGTTCAATGCAATTTTCTCCTGATGTTAGGCTCAAAAGTAATTATAATGGACCTCGAAGTTTTCAGCATCATAATCCGGCGCGTGTTAGTCGGTTACATTTGGTCACCATGAATCTTTTACCGTGTACTTTGAAGCGAGATTCTTTGGCACTTCATTTTTTGAGTGGAGTACATGTTCCAATAAGGCATGCGCCTTCCAGGTGCGGTGTTTTTGTATGTCGGTCTGCCATGCTACCGGGTGGAGGGAGTGGGACTGCCCTCATGAAATCTGCTAGTGTTTTTTTAACAAGGTCATATGACTCTTTACTTGGAAACCCTATTTTGCTTCGATTGATCCCAGCCCTTGGTATTATTGCCTTTGCTGTTTATGGTATTGAGCCACTCATTCGTCTCAGCAGGATTCTATTTCTTCAAAGGACGGATAGTAGTTGGAAGAAAAGTAGTTCGCGATATGTTATGACATCTTATTTTCAGCCATTATTATTGTGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCAATAGTCATGCCATCTCAAACTAGTCAGGCCGTGAAGCAACGACTGCTTAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTGATTCAACAAGCTCAAAAATTCTTTATGGATGCAAATGAATCAAGTGATGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAATATACACCGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGAGGTTTGGGCACAGTATTGCTTACTCTTGCCGGTCGTGAGATATTTACGAACTTTCTGTCAAGTATAATGATCCACACAACTCGGCCATTTGTATTGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCCGGCACAGTTGAGCACGTGGGCTGGTGGTCACCAACCATTATTAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTAAGAAATTTGACTCAGAAATCTCATTGGCGCATCAAGAGTTACATTTCTATTAGTCACTTGGATGTTAACAAAATTAATAGTATTGTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTGGAGCAGCAGAGATTGCACAGAAGAGTCTTTTTGGAAGACATCAATCCTGAAAATCAAGCTCTAAAGATATTGATATCTTGTTTTGTGAAAACTTCACATTTTGAGGAGTACCTCTGTGTTAAGGAGGCGATCCTTTTGGATCTTCTCAGAGTTGTGAGTCATCATCGAGCCCGGTTAGCCACTCCCATCCGCACTGTTCAGAAAGTATACAGTGAGCCTGCCTCGGAAAATATTCCCTTTGGGGATAGCATTTTCACTCGATCTAGAGCAGCAGTAAATCGCCCATTCCTACTGATAGAACCACCATATAAAGTCAACGGTGAAGATAAAGTTAAGCCATCAACTCGTTCAACTCGTGCAAATGAGGAAAAAGATGCCAAGATTGTTGAAACTGCAGCATCTGATTCCAAAGGTGATGACAATTTGGCAGCAACAACAGCCTCTCCACCTGGTGTAAACTCCAAAGATAAATCCAAGTCAAGTTCTGATGCCCAAATCCAGAACACGGGTTCTGATAGTTCGGTGGAGAAGACCTCCAAAACCATGCAGCCTAAAAAAGAAAGGGCAGGGGATGTAGGAAAGGGTAGTTCGAATTCTGCATCTAAAAATCTTGCTCAAAGTGCTGTATCTGAAACTTCGCCCGTTACTTCCCATGAATCTGGCAGGGGAGAGACTGCTTCTGCTACTTCACCGTCAAAGCAAGATGAAGAGAAATCTTCAGTGCCACCATCATCATTACGGCCTCCCTTAGAAGAGAATATTCTTCTTGGGGTTGCACTTGAAGGCTCAAAACGAACTCTTCCAATTGAGGAAGAAATGAGTCCATCTCCTAACTTGGCCGAGTCACAAGAGTTTGCTGTCCAACGGAATGGGAATGGACCTCCTACTAACAAAGATAATGGTCCAATGTCTTCATTTCCAAATGCTAAGCAGAATGACTAG 2151 0.4226 MNLCFKSSISTMVYPGSMQFSPDVRLKSNYNGPRSFQHHNPARVSRLHLVTMNLLPCTLKRDSLALHFLSGVHVPIRHAPSRCGVFVCRSAMLPGGGSGTALMKSASVFLTRSYDSLLGNPILLRLIPALGIIAFAVYGIEPLIRLSRILFLQRTDSSWKKSSSRYVMTSYFQPLLLWTGAMLICRALDPIVMPSQTSQAVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFMDANESSDARNMGLDFAGKAIYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHTTRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYISISHLDVNKINSIVADMRKVLAKNPQVEQQRLHRRVFLEDINPENQALKILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKVYSEPASENIPFGDSIFTRSRAAVNRPFLLIEPPYKVNGEDKVKPSTRSTRANEEKDAKIVETAASDSKGDDNLAATTASPPGVNSKDKSKSSSDAQIQNTGSDSSVEKTSKTMQPKKERAGDVGKGSSNSASKNLAQSAVSETSPVTSHESGRGETASATSPSKQDEEKSSVPPSSLRPPLEENILLGVALEGSKRTLPIEEEMSPSPNLAESQEFAVQRNGNGPPTNKDNGPMSSFPNAKQND* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3387 716 Gene3D - 207 309 - -
Tpr3g3387 716 MobiDBLite consensus disorder prediction 597 644 - -
Tpr3g3387 716 MobiDBLite consensus disorder prediction 541 581 - -
Tpr3g3387 716 MobiDBLite consensus disorder prediction 669 716 - -
Tpr3g3387 716 MobiDBLite consensus disorder prediction 679 716 - -
Tpr3g3387 716 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 12 703 - -
Tpr3g3387 716 MobiDBLite consensus disorder prediction 508 656 - -
Tpr3g3387 716 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 12 703 IPR045042 -
Tpr3g3387 716 Pfam Mechanosensitive ion channel 252 459 IPR006685 GO:0016020|GO:0055085
Tpr3g3387 716 MobiDBLite consensus disorder prediction 508 537 - -
Tpr3g3387 716 SUPERFAMILY Sm-like ribonucleoproteins 295 365 IPR010920 -
Tpr3g3387 716 Gene3D - 311 366 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3387 Tpr-Chr3 37371438 37378795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3387 38 690 Mechanosensitive Ion Channel Family AT1G58200 55.038 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3387 K22047 - gmx:100796022 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3387 3 37371438 37378795 Tpr3g3387 3 37371438 37378795 ECH