Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3381 ATGCTAGAAAACAACCCGAAGAAGCTTACCTTCTCCGAAATCGACGCTGCTACTCTCACACAACGGTATGATGCAGCGACTGTGTTGACAGTGCTTCAGGAATTAACACATTACACTGAGTCAAAGTTTGATTGGAATGAATTGGTAAAGAAAACTACTTCTGGTATTTCTAATGCCAGGGAATATCAGATGCTATGGCGTCACTTGGCGTATCGATATGACTTGCCTGAAAATTTGGATGAAGAAGGGGATGAACCTATGGATGATGATAGTGACATAGATTGCGAGCTGGAATCATTTCCTTCTGCAAGTGCGGAATCTACATTAGAGCCCTCAGCATGTGTGAAGGTGATTATTGCTTCCCGTACGCTAAGTGAGTCTACCCCTAGTAGCTCAACAATTGAGGCTCCATTGACCGTAAATTTTCCAGTTTGCTGTTCATCTAGAACTCCAAAGGAAATTTCACTGTCCTCTAATTTGATGGAACAAACAAGCATTATGTTTCCAGTTTTTGTTAATAGACAGACACTGCCAACTGTATCCTCAACAGATGCTTTAGAAACCAAGGGAACAGATGGTGGCACCATGGCTTCCAAAAGGAAAAGAAAAGGATGGTCAGAGGAAGAGGACAATGAGCTACGTGCTGCTGTTCAGAGATGGGGTGAAGGGAATTGGGCAACCTTGGCAAAAGGAGACCACTTTTCTATTAAGAGAACTCCACACCAATTATCTCAGAGGTGGAGCACTTTACGAAAGAAAGACGGCAGTACCAATTCAAGTGCCACTGTGACCAATCCAGTAACCCCCGTGACCACCAACACGCCCGTGACCACCAACACGCAGTATACTGCTGAACAGTTGGCAACTCGCCACTCCTTAAATTTAGCTCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGAATGACTGATCCTGGTAGGACATCCACATCAATTAAAAATCAAGTGCAGAGTCGTAATACAACACAAGTCTCCTCAGTTCGTAGTTCTGTACCACCTCAGACTCAAGCCTCCACTGTTCGTAGTTCTGTACCACCTCAGACGCAAGTCTCCACAGTTCGCAGTTCCGTACCACCTCAGCCACAAGTCTCCACAGTTCGTAGTTCCGTACCACCTCAAACACAAGTATCCACAGTTCGCAGTTCCATACCACCTCAGACGCAAGTCTCCACAGTTCGCAGTTCCGTACCACCTCAGACGCAAGTCTCCACAGTTCGCAGTTCCGTACCACCTCAGACGCAAGCATCCACAGTTCGCAGTTCGGTACCACCTCAGACGCAAGTCTCCACAGTTCGCAGTTCGGTACCACCTCAGGCGAAAATCTCCACAGTTCGCAGTTCTGTACCACCGCAGACGCAAATCTCCACAGTTCGCAGTTCTGTACCACCGCAGACGCAAATCTCCACAGTTCGCAGTTCTGTACCACCGCAGACGCAAGTCTCCACAGTTCGCAGTTCGGTACCACCTCAGACGCAAGTCTCCACAGTTCGCAGTTCTGTACCACCTCAGACGCAAGTCTCCACAGTTCGCAGTTCTGTACCACCTCAGACACCAGTCTCCACAGTGCGCAGTTCTGTACCACCTCAGACACAAGTCTCCACTGTTCGTAGTTCTATACCAACTCAGACGCAAGTCTCCACTGTTCGTAGTTCTATACCAGCTCAGCGTCCATCTCAACAAGCTTGTGGTTCCCCTGCAAACCCCAAATTAGCCTCTGAAAATCCAGTCTCAAAGAGTAATGCAATTCCAGCTTGTGAGTTAAAACCTGCCATTGTTCATTCTGGAGCACAAACTGTTTCACGATCAAATGCTATGCCACAATTGAAGGTTGCTCAAGCGAAAAGTGTGGTACATACTGTGCCTGCTGGCGGTTCTTTGACAAAGACACCCATTTCTGCTGGTTTGCCTTCTGACCAAAAGGTTCATTCAAATGTGCCTGCTGGTAGTTCTTTGACAAAGACAACCATTTCTGCTGGTTTGCCTTCTGACCAAAAGGGACATGTTACCTCTGTAAAAGAAGAGGAAAAAAGAGTTTCTGATCCTGGCTCTGCACCAAAAGAGGTGAAAGGAGAGGAAGCTTCGACATCAACTACTCAGGGCAAGGTAGATAGCAAACTGGATAAGATGAGGCTAGATTTAGATAAAGCCAAAAGCATGCCCAGTGAGAAAGTTTTGGAACATAAAGCAGTGTCCCATAATTCAGGAGAGTGTGAAGAGCAAGGAAGTGTTAAGAATTCAAATTGTACCCCCAAGAAGGCAACTGAGAATGGAAATGGCAATTCGAATAAGGAAAGTCAAGTTCTAAATCAAGACAAGAAGACAGTTTCTATTACTGGAAACTCTAACCATCAAAACGTGAACGAGAAACTCGTAAATTTGCCAAAGCAGGGTGAATGCCGTCAAGGTTTGGAAGTGCCGTGA 2442 0.4615 MLENNPKKLTFSEIDAATLTQRYDAATVLTVLQELTHYTESKFDWNELVKKTTSGISNAREYQMLWRHLAYRYDLPENLDEEGDEPMDDDSDIDCELESFPSASAESTLEPSACVKVIIASRTLSESTPSSSTIEAPLTVNFPVCCSSRTPKEISLSSNLMEQTSIMFPVFVNRQTLPTVSSTDALETKGTDGGTMASKRKRKGWSEEEDNELRAAVQRWGEGNWATLAKGDHFSIKRTPHQLSQRWSTLRKKDGSTNSSATVTNPVTPVTTNTPVTTNTQYTAEQLATRHSLNLALDMPFKKLTAPGMTDPGRTSTSIKNQVQSRNTTQVSSVRSSVPPQTQASTVRSSVPPQTQVSTVRSSVPPQPQVSTVRSSVPPQTQVSTVRSSIPPQTQVSTVRSSVPPQTQVSTVRSSVPPQTQASTVRSSVPPQTQVSTVRSSVPPQAKISTVRSSVPPQTQISTVRSSVPPQTQISTVRSSVPPQTQVSTVRSSVPPQTQVSTVRSSVPPQTQVSTVRSSVPPQTPVSTVRSSVPPQTQVSTVRSSIPTQTQVSTVRSSIPAQRPSQQACGSPANPKLASENPVSKSNAIPACELKPAIVHSGAQTVSRSNAMPQLKVAQAKSVVHTVPAGGSLTKTPISAGLPSDQKVHSNVPAGSSLTKTTISAGLPSDQKGHVTSVKEEEKRVSDPGSAPKEVKGEEASTSTTQGKVDSKLDKMRLDLDKAKSMPSEKVLEHKAVSHNSGECEEQGSVKNSNCTPKKATENGNGNSNKESQVLNQDKKTVSITGNSNHQNVNEKLVNLPKQGECRQGLEVP* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3381 813 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 514 - -
Tpr3g3381 813 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 536 669 - -
Tpr3g3381 813 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 640 812 - -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 674 694 - -
Tpr3g3381 813 CDD SANT_TRF 205 252 - -
Tpr3g3381 813 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Tpr3g3381 813 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 194 210 - -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 188 210 - -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 310 582 - -
Tpr3g3381 813 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 306 582 - -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 660 813 - -
Tpr3g3381 813 Pfam Myb-like DNA-binding domain 202 250 IPR001005 -
Tpr3g3381 813 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 536 669 - -
Tpr3g3381 813 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 514 - -
Tpr3g3381 813 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 640 812 - -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 742 798 - -
Tpr3g3381 813 Gene3D - 195 258 - -
Tpr3g3381 813 SMART sant 201 253 IPR001005 -
Tpr3g3381 813 MobiDBLite consensus disorder prediction 710 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3381 Tpr-Chr3 37315899 37322929 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr3g3381 Myb_DNA-binding 1.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3381 - - mtr:MTR_3g100180 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3381 3 37315899 37322929 Tpr3g3381 3 37315899 37322929 ECH
Tpr4g2530 4 27468629 27472122 Tpr3g3381 3 37315899 37322929 PCT