Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3372 ATGGCGGAGCAACCACTTCCGATCGAGAATCCAGCAACTCCAGTTGTCGACGAAGACGACGACGGCGACGAGGACTACACCGGTGGTGATGAAACTATGGATGAATTGGAAGAGGAAACACCAAATGTTAATCCAGTGAACGTTTCAGCTGGTGCGAATCACGCCGACGTCGTTTTGCCTCCGACGCGTATTGGTGAACTCACTCTTTCTTTTGAAGGTCAGGTTTACGTCTTCCCCGATGTCACACCTCAGAAGGTTCAAGCTGTTTTGCTGCTTTTGGGAGGACGAGATGCACCAGCAGGCATCCCTAAAGTTGAACAACGATTTGATCAAAGTATCAAGAGCATGGGCGATATTGCAAGGCATCCAAATCTTTCACAAAGAATAGCCTCCTTGGTCCGGTATCGCGAAAAACGCAAGGATAGATGTTTTGAAAAGAAAATTAGATACACCGTGAGAAAAGAAGTGGCAGAAAGGATGCATCGGGAGAAGGGGCATTTTGCATCCTTGAAGCAAAGTCCTGGTTCCTCTGGTTCGTGTGCTGGTCAAGATGGCACTCCAAATCCTGAACCTTTACGTAAATGTACACATTGTGGAGTCAGCGAAAAACATACTCCTGCAATGCGTCGTGGGCCAGCTGGACCAAGAACTTTATGTAATGCATGTGGCCTCATGTGGGCCAACAAGGGGACACTCAGAGATCTCAGGAAGGGGGGAAGAAATCTTTCTGTTGAGCAAAGTGGTCTGGACCCTTCTATTGATGTCAAGCCTACTGTTCTTGAAGGGGAATTGTCAGTCATGGGAAATGAACAAGGTATTTCTGAAAATCCTTCCAAGGCCATTGCTGCTGAAGGTTCAAATAATCATGCATTAAATCCAAGTGATGAGGAATTGCCTGAATCTGCAGAACACCTTACAAACACACTGCCATTGGTAATTGACCATTCTTCGGAAAATGATGAACAGGAACCCCTGGTTGAGCTTTCGAATCCTTCAGATACAGGAACATCTAATCCTTCAGATACAGATATTGACATTCCCGGAAACTCTGATTAA 1056 0.4593 MAEQPLPIENPATPVVDEDDDGDEDYTGGDETMDELEEETPNVNPVNVSAGANHADVVLPPTRIGELTLSFEGQVYVFPDVTPQKVQAVLLLLGGRDAPAGIPKVEQRFDQSIKSMGDIARHPNLSQRIASLVRYREKRKDRCFEKKIRYTVRKEVAERMHREKGHFASLKQSPGSSGSCAGQDGTPNPEPLRKCTHCGVSEKHTPAMRRGPAGPRTLCNACGLMWANKGTLRDLRKGGRNLSVEQSGLDPSIDVKPTVLEGELSVMGNEQGISENPSKAIAAEGSNNHALNPSDEELPESAEHLTNTLPLVIDHSSENDEQEPLVELSNPSDTGTSNPSDTDIDIPGNSD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3372 351 ProSitePatterns GATA-type zinc finger domain. 195 222 IPR000679 GO:0006355|GO:0043565
Tpr3g3372 351 ProSiteProfiles CCT domain profile. 128 170 IPR010402 GO:0005515
Tpr3g3372 351 PANTHER GATA TRANSCRIPTION FACTOR 28 7 350 IPR045280 GO:0006355
Tpr3g3372 351 Pfam CCT motif 128 169 IPR010402 GO:0005515
Tpr3g3372 351 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 190 237 - -
Tpr3g3372 351 SMART GATA_3 189 242 IPR000679 GO:0006355|GO:0043565
Tpr3g3372 351 Gene3D - 189 246 IPR013088 GO:0006355|GO:0008270
Tpr3g3372 351 MobiDBLite consensus disorder prediction 323 351 - -
Tpr3g3372 351 Pfam GATA zinc finger 195 231 IPR000679 GO:0006355|GO:0043565
Tpr3g3372 351 PANTHER GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 7 350 - -
Tpr3g3372 351 Pfam tify domain 67 94 IPR010399 -
Tpr3g3372 351 MobiDBLite consensus disorder prediction 165 188 - -
Tpr3g3372 351 CDD ZnF_GATA 194 238 IPR000679 GO:0006355|GO:0043565
Tpr3g3372 351 MobiDBLite consensus disorder prediction 170 184 - -
Tpr3g3372 351 MobiDBLite consensus disorder prediction 14 38 - -
Tpr3g3372 351 MobiDBLite consensus disorder prediction 1 49 - -
Tpr3g3372 351 ProSiteProfiles Tify domain profile. 60 95 IPR010399 -
Tpr3g3372 351 SMART tify_2 60 95 IPR010399 -
Tpr3g3372 351 MobiDBLite consensus disorder prediction 311 351 - -
Tpr3g3372 351 ProSiteProfiles GATA-type zinc finger domain profile. 189 235 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3372 Tpr-Chr3 37208323 37214837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3372 8 237 Tify Gene Family AT1G51600 51.020 9.11e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Tpr3g3372 CCT 7.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3372 - - gmx:100801328 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3372 3 37208323 37214837 Tpr3g3372 3 37208323 37214837 ECH