Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3346 ATGGCAGCAGAGTTGGTTGCTGGGGCATTTTTTTCTACTTGCTTTCAAGTGATTTTTGAAAAGTTGGGAGAATTGTGCTTCAGAGATTACTTAGGTGGTAATAAACTTGACGAGCTGAAGAAAAAACTTGATATTAAACTCAACACTATCAACCATGTCTTGGAAGAAGCAGAGATAAAGCAGTATGAAAGCACACATGTGAAGAACTGGGTTGATGAACTTAAACATGTTGTTTATGAGGCAGACCAAATTTTGGATGAGATTCATACTGATGCAATGCTGAATAAGATGAAAGCTGAATCTGAACCTGTTGTTACCACTAATGTATTGGGCTTCTTTTCATCTACAATGACAAATCCATATGAATATAGGATCAATGAACTACTGGAGAAACTTGAATTACTTGCAGATCAAACGAAAATGTTGGGATTGGAAGATGCACGTCTTTGTGGTAGTAAAGATGGCCTAGTCAGTTGGAAACCATCAAAAAGACCGTCAACTACAGCTCTTGTGGATGAGTCAAGGATATATGGTAGAGATGTTCATGAGGAAGAGCTTATCAAATTTTTACTTGAAGGCGGCGATGACAGTGGCAACCAAGTTCCAATAATCAGCATAGTTGGTTTAGGAGGGATGGGGAAAACCACCCTTGCTAAGCTTGTGTACAATGACAACAAGATAAAGGAGCATTTTGATCTTAAAGCATGGGTCTATGTTTCAGAATCTTTTAATGATGTTGGAGTCACCAAAGCAATTCTCGAATCATTTGAGTTTTCAGCAAATGGTGAAAACTTGAATCTACTTCAACATCAACTGCAACACAAACTAACAGGCAAAAAATACTTGCTTGTTTTAGACGATATTTGGAACGGGAATGCTGCATGTTGGGAGGACTTACTACGTCCATTTAATCATGGATCTTCTGGAAGTAGGATTATTGTGACAACACGTGAAAAAGAGGTAGCAAATGTCCTGAATTCAAAGTTATTTGATTTACCACAATTGGACAAAAGTGATTGTTGGAGTTTATTTGAGACACACGCATTTCAAGGCAGGAATAAGTGCGAATATCCAGAACTTGAATTAATTGGAAAGAAAATAGTGAACAAGTGTGGAGGGTTGCCTTTAGCTGTAAAAACATTGGGCCAACTCTTGCGAAGAAAATTCTCTGAATATGAATGGAGGAAGATGTTAGCGACTGATATGGGGCGATTATCAGATAAGAACAACAAAGTTAATGCAGTGTTGAGATTGAGTTACCACAGTCTCCCTTCCATTCAAAAGCGTTGTTTTGCTTATTGTTCTATATTTCCCAAAGGTTGGTGGTTTGACAAAGGTGAATTAATCAATTTTTGGATGGCAGAAGGTTTGTTGGACTGTGGAGAAGCAGACAAAAGTGAAGAAGAGTTGGGCAGTGAAATTTTCAACGATCTTGAGTCAATTTCATTTTTGCAACAATCACTTCGTCGTACAAAAGGTTTTACACATGCGCACTACTTTGTCATGCATGATCTTGTCATTGATTTAGCAAAATCAGTGTCAGGAGAATTTTGTAAGGAATTAGAGGGTGATAGGGTGGAAGGTAGCCTTGAAAGGACACGTCACATTTGGTGCTCTCTTCAATTAAATTGTGGTGATAAATTACTAGAGCCAATATGTGAAGTTAAGGGACTACGCAGTCTGATACTAAATGGCAACAGGACTATGTTGATAAGCAGCAAAGTGCAACATGATCTGTTTTCAAGTCTAACATGTTTGCGGATGTTATCATTTGCCTATTGTCATCTCTCAGAGCTAGTTGATGAGATAGGCAATTTAAAACTTTTGCGCTATCTAGACCTTTCTGACACGAAGATTACAAGCCTACCTGATACAATCTTTACGTTGTATAATTTGCAAACCCTCTTGTTGCAAGGGTGTGAGTTGACAGAGCTCCCTTCAAATTTTTCCAAGCTCATTAATTTACGTCATCTTGAACTCCCTTATTTAATGAAGATGCCAACGAATATGGGAAAGCTAAACAATTTTCAAACATTGACTTATTTTATTGTGGAGAAAATTGTTCTTAAAGGCTGGGGTAATGTCAATGATCATGTAGATGCTGCTGCAAAATCCAATTTGAAAGATAAGAAGTACTTAGAAGAATCATATATGATGTTTGATGGTAGAAGAGAAGAGATGGTTGATTCAATAGTTGAATTTGAAAGATATGTGTCTGCGTTGGAGGCTCTTCAACCAAATAGCAACTTCAAGAGGCTCACTGTTGAATACTACAAAGAGAATCATAAATCTTGTCCAAATTGGCTAGGGAGTTGTCCTTTACCCAACATAGTATTTCTTAAACTACAGAGCTGTGGACTAAGTTTTCATTTGCCGCCACTTGGTCAGCTTCCTTGGCTAAAAGATCTTTACATTTCTGGTTGTGATGGAATAAAGATCATTGGCGAAGAGTTTGTTTATGACAATAATAATAATAATTCAACAAGTCTTTCGTTCAGGTCTCTTGAAGTTTTGAGATTTGAGCAGATGGGCAATTGGGAGGAATGGTTATGTCTTGAAGGGTTTCCTTTACTTAAAGAGCTTTATATAAGTGAATGTCCCAAACTGAAAAGGGTTTCGCCTCAACACCATCCTTCTTTACAAATATTGGAGATAAGGGACTGCAACAAGTTGGAGGAATTTTTATGTCTTGAAGGATCTCCTTTGCTTAAACAGATTTCTATAAGTGAATGTGGCAAATTGAAAAGGGCTCCCTTGCCTCAACACCTTCCTTCTTTACAAGAGTTGAAGATTAGATTTTGTGAAATGCTGGAGGTATCAATTCCCAAGGGTGATAGTATCATAGAGTTAGATCTACAGAAATGTGATCGGATTTTGGTAAATGATCAATTGCCGACCAGCTTGAAAAGGCTTGTCCTTTGGGAAAATCAGTACACCGAGTTTGTCGTGGAGCAAAATTTAGGGAACAATACCATTCTTGAAGAGTTGAGGTTTAATTTTAAAGGCTTTGTAAACTGTCCCTCTTTGGATTTGCGTTGCCATAATTCTCTTCGTGGACTTGTAATAAAAGGCTGGTGCTCCTCCTCTCTTCTCTTTGAACTACATTTATTCACCAATCTTCAGTATCTATGGTTGTACGATTCCCCGCAGCTGGAATCACTTCCAAGGGGAGGTTTGCCTTCCAACTTGAGCGAACTTGTAATAAGCAATTGCCCTAAACTTATTGCTTCCAGAGAGGAGTGGGGTTTGTTCAAACTCAATTCTTTGAAAACATTGAGATTCAGTGATGAGTTTGAAAACGTGGAGTCCTTCCCAGAGGAGAATCTGCTGCCACCAACTCTTGAGTGTCTTCATATAAGAAATGGTTCAAAGCTAAGAATAATAAACTACAAGAGTTTTCTCCACCTCAATTCTCTCTACCAGCTATTTATTTGGAACTGCCCTAGTCTTGAGAGCTTGCCAAAGGAGGGTCTACCCAGCTCCCTTTATTTCTTGTGGATTAAAAATTGTCCATTAATAAAGGACAAGTACCAAAATGAGTATGGTCACATCCCTCATGTGACCATAGAATGA 3573 0.3818 MAAELVAGAFFSTCFQVIFEKLGELCFRDYLGGNKLDELKKKLDIKLNTINHVLEEAEIKQYESTHVKNWVDELKHVVYEADQILDEIHTDAMLNKMKAESEPVVTTNVLGFFSSTMTNPYEYRINELLEKLELLADQTKMLGLEDARLCGSKDGLVSWKPSKRPSTTALVDESRIYGRDVHEEELIKFLLEGGDDSGNQVPIISIVGLGGMGKTTLAKLVYNDNKIKEHFDLKAWVYVSESFNDVGVTKAILESFEFSANGENLNLLQHQLQHKLTGKKYLLVLDDIWNGNAACWEDLLRPFNHGSSGSRIIVTTREKEVANVLNSKLFDLPQLDKSDCWSLFETHAFQGRNKCEYPELELIGKKIVNKCGGLPLAVKTLGQLLRRKFSEYEWRKMLATDMGRLSDKNNKVNAVLRLSYHSLPSIQKRCFAYCSIFPKGWWFDKGELINFWMAEGLLDCGEADKSEEELGSEIFNDLESISFLQQSLRRTKGFTHAHYFVMHDLVIDLAKSVSGEFCKELEGDRVEGSLERTRHIWCSLQLNCGDKLLEPICEVKGLRSLILNGNRTMLISSKVQHDLFSSLTCLRMLSFAYCHLSELVDEIGNLKLLRYLDLSDTKITSLPDTIFTLYNLQTLLLQGCELTELPSNFSKLINLRHLELPYLMKMPTNMGKLNNFQTLTYFIVEKIVLKGWGNVNDHVDAAAKSNLKDKKYLEESYMMFDGRREEMVDSIVEFERYVSALEALQPNSNFKRLTVEYYKENHKSCPNWLGSCPLPNIVFLKLQSCGLSFHLPPLGQLPWLKDLYISGCDGIKIIGEEFVYDNNNNNSTSLSFRSLEVLRFEQMGNWEEWLCLEGFPLLKELYISECPKLKRVSPQHHPSLQILEIRDCNKLEEFLCLEGSPLLKQISISECGKLKRAPLPQHLPSLQELKIRFCEMLEVSIPKGDSIIELDLQKCDRILVNDQLPTSLKRLVLWENQYTEFVVEQNLGNNTILEELRFNFKGFVNCPSLDLRCHNSLRGLVIKGWCSSSLLFELHLFTNLQYLWLYDSPQLESLPRGGLPSNLSELVISNCPKLIASREEWGLFKLNSLKTLRFSDEFENVESFPEENLLPPTLECLHIRNGSKLRIINYKSFLHLNSLYQLFIWNCPSLESLPKEGLPSSLYFLWIKNCPLIKDKYQNEYGHIPHVTIE* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3346 1190 SUPERFAMILY L domain-like 879 1174 - -
Tpr3g3346 1190 Gene3D Ribonuclease Inhibitor 875 958 IPR032675 -
Tpr3g3346 1190 SMART LRR_typ_2 630 651 IPR003591 -
Tpr3g3346 1190 SMART LRR_typ_2 583 605 IPR003591 -
Tpr3g3346 1190 SMART LRR_typ_2 606 629 IPR003591 -
Tpr3g3346 1190 SMART LRR_typ_2 1037 1061 IPR003591 -
Tpr3g3346 1190 Pfam Rx N-terminal domain 18 97 IPR041118 -
Tpr3g3346 1190 Gene3D - 420 513 IPR036388 -
Tpr3g3346 1190 PRINTS Disease resistance protein signature 203 218 - -
Tpr3g3346 1190 PRINTS Disease resistance protein signature 275 289 - -
Tpr3g3346 1190 PRINTS Disease resistance protein signature 371 385 - -
Tpr3g3346 1190 PRINTS Disease resistance protein signature 604 620 - -
Tpr3g3346 1190 Gene3D Ribonuclease Inhibitor 537 874 IPR032675 -
Tpr3g3346 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 434 IPR027417 -
Tpr3g3346 1190 Gene3D - 162 330 IPR027417 -
Tpr3g3346 1190 ProSiteProfiles Leucine-rich repeat profile. 608 629 IPR001611 GO:0005515
Tpr3g3346 1190 Gene3D - 15 124 - -
Tpr3g3346 1190 SUPERFAMILY L domain-like 501 938 - -
Tpr3g3346 1190 Pfam NB-ARC domain 182 421 IPR002182 GO:0043531
Tpr3g3346 1190 PANTHER DISEASE RESISTANCE PROTEIN RP 29 938 IPR044974 GO:0006952
Tpr3g3346 1190 Gene3D - 334 419 IPR042197 -
Tpr3g3346 1190 Gene3D Ribonuclease Inhibitor 963 1184 IPR032675 -
Tpr3g3346 1190 PANTHER OS05G0414200 PROTEIN 29 938 - -
Tpr3g3346 1190 Coils Coil 36 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3346 Tpr-Chr3 36894952 36899562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3346 204 388 WRKY Transcription Factor Family AT5G45050 25.532 1.86e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3346 - - mtr:MTR_3g022600 1403.27