Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3338 ATGCCGATCAACAGAAGCATTACAAGAGAATATATTGGCAAGCCAATAAGATGCAAAGCTGCAATATGCAGAAAATCAGGTGAACCTCTTGTTATAGAGGAAATTGAAGTAGACCCACCAAAATCATGGGAAGTACGGATCAAAATTTTATGCACATCTCTTTGTCACTCTGATCTCACCTTTTGGAAACTGGATCCTTCAGCACCTCCTGCTGCGTTTCCTAGAATTTTAGGACACGAAGCCGTGGGAGTTGTGGAGAGTGTAGGGGAGCACGTGGAAGAAGTGAAAGAAGGCGAGTTAGTGGTGCCGGTGTTTCTCCCAAACTGTGGAGAATGCAAAGACTGTGAAAGCACAAAAAGCAACACTTGCAGCAAGTTTGGGAGCAAACTATTCTTTGGCATGCCAAGAGATGGAACAAGCAGGTTTAGGGACATGAATGGAGAAGTGGTGCACCATTTGTTGTGTGTCAGCAGTTTTTCTGAGTATACTGTGGTGGATGTAACACATTTGGTTAAAATTGCACAAGATTTTCCTCTTGATAAGGCTTGCTTGCTCAGTTGCGGTGTTTCCACAGGGGTAGGGGCCGCGTGGAAGGTAGCTGACGTAGAAAAAGGGACCACGGTGGCTATTTTTGGCCTTGGTGCTGTAGGCCTAGCTGTTGCTCTAGGAGCAAAACAAAGAGGAGTGTCAATGATCATAGGGATCGATCTAAATGAGAATAAATTTGAAATAGGAAAACAATTTGGAGTAACTCATTTTGTGAATCCCACCACTTGCAAGGAGAAGTCGGTCGGCGAGGTGATTAAGGATATGACAAATGGAGGAGCCGATTATTGCTTTGAGTGCATTGGCTTAGCATCACTAATGGAAGAAGCTTTCAATAGCAGCCGAGAAGGTTGGGGAAAAACAGTGATAATAGGGGTGGAAATGCACGGTTCACCACTGACTTTGAATCCTCGTACCATGCTAAGAGGCAGAACTATCACTGGATCACTATTTGGAGGCATCAAACCAAAATCTGATCTTCCCCTCCTTGCTCAGAAGTACTTAGACAAAGAGCTTAACTTGGATGGGTTCATAACACAAGAAGTGGACTTCAAAGACATTAACAAAGCTTTTGATTATATGGTGCAAGGAAAGAGCATTCGTTGCATTATAAGGATGGATCATTAA 1173 0.4348 MPINRSITREYIGKPIRCKAAICRKSGEPLVIEEIEVDPPKSWEVRIKILCTSLCHSDLTFWKLDPSAPPAAFPRILGHEAVGVVESVGEHVEEVKEGELVVPVFLPNCGECKDCESTKSNTCSKFGSKLFFGMPRDGTSRFRDMNGEVVHHLLCVSSFSEYTVVDVTHLVKIAQDFPLDKACLLSCGVSTGVGAAWKVADVEKGTTVAIFGLGAVGLAVALGAKQRGVSMIIGIDLNENKFEIGKQFGVTHFVNPTTCKEKSVGEVIKDMTNGGADYCFECIGLASLMEEAFNSSREGWGKTVIIGVEMHGSPLTLNPRTMLRGRTITGSLFGGIKPKSDLPLLAQKYLDKELNLDGFITQEVDFKDINKAFDYMVQGKSIRCIIRMDH* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3338 390 Pfam Zinc-binding dehydrogenase 215 338 IPR013149 -
Tpr3g3338 390 SUPERFAMILY GroES-like 13 198 IPR011032 -
Tpr3g3338 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 351 IPR036291 -
Tpr3g3338 390 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Tpr3g3338 390 Gene3D - 22 384 - -
Tpr3g3338 390 SUPERFAMILY GroES-like 339 387 IPR011032 -
Tpr3g3338 390 Gene3D - 192 331 - -
Tpr3g3338 390 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 9 388 - -
Tpr3g3338 390 PANTHER ALCOHOL DEHYDROGENASE 9 388 - -
Tpr3g3338 390 Pfam Alcohol dehydrogenase GroES-like domain 44 173 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3338 Tpr-Chr3 36791332 36800236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3338 44 349 Monolignol Biosynthesis Gene Families AT4G37990 27.832 1.82e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3338 K00121 - zju:107420743 547.354