Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3333 ATGGAGTCTGAAGCTCACATTCAAACTCAAAGAGATCGCAGAACAGATGCTCTTGGAGATCTCCGAGTTCTTCCCGACGAAACCATCTGCTCAATTTTGGAACGACTCACTCCTCGAGATGTTGCTCGCGTCGCTTGCGTTAGCAGTGTGATGTATATACTATCCAATGAAGAACCATTATGGATGACTCTATGCCTAAGAGGAGCATCTGGTTTTCTTCAATACAAAGGCTCTTGGAAGAAAACTGCTCTGCATAATGAGAATCTTCCAGATAAGTACAAAGAGTTGCATAGACCGCCTTTACATTTTGATGGATTCAACTCTTTATTTTTGTATCGGAGGTTATATCGGTGTCATACCACATTGGATACATTTTATACAGTCGGTGGAAATGTGGAAAGATTAAACGACATCTCATTGAAGGACTTCTATAACGAGTATGACATGAAGAAACCGGTCATGATTAATGGACTGGCGGATACATGGCCTGCTAGGCATAAATGGACAACTGATCAGCTGTTACTAGACTATGGAGACGTAGCGTTTAAAATTTCTCAAAGGAGTTCCAAAAAGGTCTCCATGAAGTTCAAGGATTATGTCTCCTACATGGAAGTTCAACACGATGAAGACCCATTATATATTTTTGACGAAAAGTTTGGCGAACATGCACCTAGCTTATTGAAGGATTACTGTGTGCCTCATCTTTTTCAAGAAGACTTCTTCGATATCTTAGATACAGATAAACGACCATCCTATAGGTGGCTCATAATTGGACCACAGAGATCCGGTGCCTCTTGGCATGTTGATCCAGCTCTTACAAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCATTATATCCACCTGGAAAAGTGCCGTTAGGTGTGACGGTACATGTTAATGAAGAAGATGGTGATGTCAGTATTGAGACACCATCATCACTGCAGTGGTGGCTAGATTTTTATCCTCTTCTTGCTGATGAAGACAAGCCGATTGAATGTACACAACTTCCTGGAGAGACAATTTATGTTCCGAGTGGATGGTGGCACTGTATTTTAAATTTGGAAACAACTATTGCAGTCACACAGAATTTTGTGAATTCTAATAACTTTGAGTTTGTATGTTTGGATATGGCACCTGGTTATCGTCATAAAGGAGTTTGCCGTGTAGGTTTGCTTGCTCTTGAAGAAGATGTTTATGAAAATGTCATACCGAACATGTCATGTAATGAAGAAAACTTAAGTTACTCTGATTTATCAAGGAAAGAGAAAAGATCCAAAACTCTGAAAGATGTAGATGATCTATGTTTTGAAAGAGAAATAAGCGGTGTATCTAGAAGCTATAATTTATGGAAAGGTGGATTTTCTTATGATATAAACTTCTTGTCCATGTTTTTGGATAAGGATAGAGACCACTACAGTTCTGAGTGGAGCTCGGGCAACAGCATTGGACAGCGAGAACTAAGAGAATGGTTATCCAAGCTTTGGATTCAAAAGCCAGATATGAGAGATCTAATATGGAAGGGAGCATGTATTGCACTAAATGCGGACAAGTGGTTAGAATGCTTGTCAAAAATTTGTGCCTTCAACAATCTGCCCCCTCCCACTGATGACGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTATCTCGTGGGGAACAATGTTGTTAAGATTTTTGTTGAAGGAGGACTGGAAGCATCACTTTATGGTTTAGGCACAGAGCTAGAGTTTTATACTCTGCTACTTGAAGCCGACTCGCCTCTCAGGAAACATATTCCTAGTGTTCTGGCCAGTGGGGTTGTTTATCTTGAAGACGGATCCTATAACAATTTAAGTTGGGATGGAAAAGGAGTTCCCAACATCATTCTGAAGAGCAATATCATCACAAACAAATGTGATGTTCATGGTTTCCCATTTGGGGTATGGGGCAAGAAGCTGCTAGAGAATAGGAATGCTGGGATTTCGGTGGACGGATCAGTTAGTGTAGCCAACTCAAGCATATGGCCATATATGATAACTAAGCGATGTGAAGGGAATATGTTTGCTGACTTAAGAGACAGATTATCATGGGAAGATACAACAAACTTGGCCTCCTTCTTGGGGGAGCAACTGCGCCACCTTCATCTTTTGCCACATCCACCTTTAAATAATTCATTTATATCTGATATTGAACGTGAATTAAGCTGGTCTGATGCAAATGGTTGTGTTGCAAATGTTAATGGTAAATCAAACAATGCAGCAGAATGGGGAATCTTCATCAGAATCTTAACAAAGATGAGGAAGGATGTCTCAAGCCGTTTGACCAAGTGGGGAGATCCAATTCCTAGCAAACTGATTGAGAAAATTGATGAATATATCCCATCTGATTTATCTAAGCTGCTAAATATAAACGAGAATTTCTCAAGTGGTGCCTCTAAACCTTGCTCCTGGATACATACTGACATTATGGATGATAATATTTACATGGAACCATCATCGGTTTGCTCTACCTCCAGTGGGAATACAGAAGATGCTGTCCAGGCGGACAATGGTTTATCGAATAACCATGTTGGAGTGAAATCCTGGTGTCCTAGTTACATCCTTGATTTCAGTGATCTTTCTACCGGTGATCCTATTTTTGACTTAATACCAATTTATTTGGACGTGTTTAGAGGCGATTCATATCTCCTTAAGAAATTTTTGGAAAGTTACAAACTTCCTTTTTCTTGCAACATATCTAAGTACGAGTCAGCAGAGGGTGGTCAAAAGTTTGGGCGACTTTCATATGTTGCTATGTGTTATTGTATTTTACATGATGATAATGTCTTGGGAGCTATTTTTAGCATATGGGAAGAACTGAAATCATCAGAGTCATGGGAAGAAGTTGAGATGACAGTGTGGGGAGAGCTGAACAACTACAAAGGCTTTCTTGACCATTTGCTGCATCGAAATATTTTCCGAGCCTGA 2958 0.402 MESEAHIQTQRDRRTDALGDLRVLPDETICSILERLTPRDVARVACVSSVMYILSNEEPLWMTLCLRGASGFLQYKGSWKKTALHNENLPDKYKELHRPPLHFDGFNSLFLYRRLYRCHTTLDTFYTVGGNVERLNDISLKDFYNEYDMKKPVMINGLADTWPARHKWTTDQLLLDYGDVAFKISQRSSKKVSMKFKDYVSYMEVQHDEDPLYIFDEKFGEHAPSLLKDYCVPHLFQEDFFDILDTDKRPSYRWLIIGPQRSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVSIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCILNLETTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRVGLLALEEDVYENVIPNMSCNEENLSYSDLSRKEKRSKTLKDVDDLCFEREISGVSRSYNLWKGGFSYDINFLSMFLDKDRDHYSSEWSSGNSIGQRELREWLSKLWIQKPDMRDLIWKGACIALNADKWLECLSKICAFNNLPPPTDDERLPVGTGSNPVYLVGNNVVKIFVEGGLEASLYGLGTELEFYTLLLEADSPLRKHIPSVLASGVVYLEDGSYNNLSWDGKGVPNIILKSNIITNKCDVHGFPFGVWGKKLLENRNAGISVDGSVSVANSSIWPYMITKRCEGNMFADLRDRLSWEDTTNLASFLGEQLRHLHLLPHPPLNNSFISDIERELSWSDANGCVANVNGKSNNAAEWGIFIRILTKMRKDVSSRLTKWGDPIPSKLIEKIDEYIPSDLSKLLNINENFSSGASKPCSWIHTDIMDDNIYMEPSSVCSTSSGNTEDAVQADNGLSNNHVGVKSWCPSYILDFSDLSTGDPIFDLIPIYLDVFRGDSYLLKKFLESYKLPFSCNISKYESAEGGQKFGRLSYVAMCYCILHDDNVLGAIFSIWEELKSSESWEEVEMTVWGELNNYKGFLDHLLHRNIFRA* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3333 985 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 6 907 - -
Tpr3g3333 985 SUPERFAMILY Protein kinase-like (PK-like) 672 904 IPR011009 -
Tpr3g3333 985 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 6 907 - -
Tpr3g3333 985 Gene3D - 6 95 - -
Tpr3g3333 985 Gene3D Cupin 115 369 - -
Tpr3g3333 985 Pfam F-box-like 23 67 IPR001810 GO:0005515
Tpr3g3333 985 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Tpr3g3333 985 SUPERFAMILY F-box domain 13 71 IPR036047 GO:0005515
Tpr3g3333 985 SMART cupin_9 216 379 IPR003347 -
Tpr3g3333 985 ProSiteProfiles JmjC domain profile. 221 384 IPR003347 -
Tpr3g3333 985 SUPERFAMILY Clavaminate synthase-like 120 376 - -
Tpr3g3333 985 SMART fbox_2 24 64 IPR001810 GO:0005515
Tpr3g3333 985 Pfam Cupin-like domain 150 371 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3333 Tpr-Chr3 36735607 36743785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3333 10 970 Glycosyltransferase AT1G78280 61.546 0.0 1209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr3g3333 Cupin_8 7.8e-22 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3333 - - mtr:MTR_3g099370 1841.24