Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3325 ATGAGAAACACTATAAAAACCTCTCAAACATTTTGGCAAAAACATGCACCGCACAGAGTAAGCTTGAGACTCTCTCTGATCGGAGCACAACCACTTTCCGACTCACCGGAATTCACACCATTTCATAAAACCAAAATTTCTCAATCCTCTTCATTCATCTCTGATTCTTGGTGTGAGTATTTATTGTCAAATACTCACTCCTTGTTGACATCGCTCTGGTGTTATGCGTATAAGGAAGGACCGGAGAAAACAAAGCAGCTAGTCATGGAATGCAACAAAGATGCTGCCTTAAGGGCTAAAGAGATCGCAGAGAAGAAGATTTTAGAAAAGAAGTTTGTTGCTGCAAGTAAACTTGCAGAGAAGGCTCAAACCTTGTATCCCAACATTGATGGCCTCCCTCAATTGATAGCAACCATTAAGGTGTATGTCGCTTCTCTAACAACAGTAGGCGAAGAATTAGATTGGTATGCGATCCTCGGTGCACAACGCGTGGATGATGATGAAAAGATTCGGAAATGTTATAAGAACATGGCTCTTACTCTGCACCCTGATAAAAACAAGTCAGTAGGTGCGGAGGGCGCATTTAATCTTGTCTCACAGGCTTGGACTATATTATCTGATAAAGCTAAGAGAGCCACCTTTGATAAAAAGTATCGGTTGTGGGATTTGTTTAACGATATCCCTGGTGGGGTACCTCCTATACTTGCTAGTCGATACGGTTTGTCGAATGCCGCTAACCCTGCTAGGAGACCTCCTGTACCTGCTAGTCAGAACGGTTTTTCTAATAACGCTAACCCTGCTGGGATACCTCCTATACCCGCTAATCAGAACGGTTTGTCTAATGCAGCTAACCCTGCTGGGAGACCTCCTGTACCCGCTAATCAGAACGGTTTGTCTAATACCACTAACCCTGCTGGGAGACCTCCTGTACCTGCTAGTCAGAATGGTTTCTTTAATGCTGCAAACCAGAAGGACAGAGATCATATGAGTGCTGCTCATACCAATCCTACTTCAAGACCCCCCTTAAAAACACCGACATTTTGGACCTTGTGCAGTTTATGCAGGACACATTACGAGTACCCTGCTGTCTATAAAGACTGCAATCTTTCCTGCACCACCTGCAAAAAGCCATTTTTAGCTTCTGAGGTACCACCCCCATCTGTATACACAAATGCTTCATCCGCTTCAAGACCTTCTCAGATGATGCAACACAATTTCAACTCAACTGGAGTGGATAGAAACTGTCATGTTTCAAGTATGACACAGATGTCTGCTGTCAACTCATTGGTTGGTTCAATGCCTGGTGGCATTTCTGGTGGAGCTCTTGGTTCTTTTACGAGGCCATCTGTGAATTTGAAGAGAAAGTATGAAGATTCGGCACCTGTCATGAGGGAGGAGGTGCATTTTGGGAAAACTCATGCTGTTGAGAGAACTGCTGCTGGTTCAGATTTTCAGTCTTGTCAGAAAAAAAGGTGCACAGGTGAACATAAAGTTGATAGTGATAGAAGAGACATGGAAACTGAGATGACATCAAAAAAAGGAATAAATTCGACCAATGGGTTTGGGTCTCTGAAGAATAGTTTTGATGCTGGAAAGGTTAGTGCTGCCGGAAATTTCAGACGAAATGGTATTAGGGACATATCTCAGCAGCAAATGAAGAACATCTTGGCGGGAAAGGCCCGAAATGTGATTCTTAAGAAGCTTGATGAGTTGAAGGAGAGTCGTAGAAAGCTCGATGAGTGGAAGGCGATTCGTAAAAAGGTTGATGAACGGCATCCGTCTTCTATACTAAAGAATACTGATTCAGAAGTCAGAGTGAAGGACACAGTTAAGGCTATTAATGGTGTGAAGCCTGGTCCAAAAGCAATTGTTGATTCTGAGACCAACAACAACTCTATCTCTGCTGATTCAGAGGTGCTTGGAGTCTCCATGGATGTTCCAGACCCAGATTTCCATGATTTTGATGGGGACCGGGTTGAGGACACTTTTGGTGAGAATCAGGTGTGGGCTGCTTATGATGATGAGGATGGCATGCCGCGCTACTACGCATTTATCCACAGTGTGGTCTCGAAGAAGCCATTCCAAATGAAAATAAGCTGGCTGAGTTCCAAAACCAATGATGAATTGGCACCGATAAGGTGGATTGCAGCTGGCTTTCCAAAGACCACGGGGGATCTCCGACTAGGCAAGCGTGCAATCTCTAGCACTCTCAATTCTTTCTCGCACAAGGTTGAGTGGACAAAAGGTTCAAGGGGACTTATCCATATATATCCAAAGAAAGGTGAAGTTTGGGCTCTATATCGGAACTGGTCCCTGGATTGGGATGAACTCACTAAAGACCAAATCATACATCAGTATGACATGGTGGAAGTGCTTGGAGACTACAATGAAGAGCACGGTGTGAATGTTGCTCCACTTTTCAAGGTTGCAGGTTTCAGGACAGTATTCCGCAAGAATGCTGATCCGAGAAAAATCAGAAACATTCCGAGGGCAGAAATGTTTCGTTTTTCACACAAAGTACCTTCATACTTGCTTACTGGACAAGAAGGTGACAATGTTCCTAAAGGTTGCTTGGAGCTGGATCCTGCTTCTACACCTATGGAACTTCTTCAGTTGATCACCGATGATGCTCCAAAGCAAGAAGATTCTGCTGAAGATGTTCCGAGACAGGAGGTGGCTGAAGCACAGGAAGGGAAGGTATGGCCTGAGAATTTGCATGTATATAAGCGGATGCGTTTTGGGGGAAAGAGCAAATAG 2757 0.4418 MRNTIKTSQTFWQKHAPHRVSLRLSLIGAQPLSDSPEFTPFHKTKISQSSSFISDSWCEYLLSNTHSLLTSLWCYAYKEGPEKTKQLVMECNKDAALRAKEIAEKKILEKKFVAASKLAEKAQTLYPNIDGLPQLIATIKVYVASLTTVGEELDWYAILGAQRVDDDEKIRKCYKNMALTLHPDKNKSVGAEGAFNLVSQAWTILSDKAKRATFDKKYRLWDLFNDIPGGVPPILASRYGLSNAANPARRPPVPASQNGFSNNANPAGIPPIPANQNGLSNAANPAGRPPVPANQNGLSNTTNPAGRPPVPASQNGFFNAANQKDRDHMSAAHTNPTSRPPLKTPTFWTLCSLCRTHYEYPAVYKDCNLSCTTCKKPFLASEVPPPSVYTNASSASRPSQMMQHNFNSTGVDRNCHVSSMTQMSAVNSLVGSMPGGISGGALGSFTRPSVNLKRKYEDSAPVMREEVHFGKTHAVERTAAGSDFQSCQKKRCTGEHKVDSDRRDMETEMTSKKGINSTNGFGSLKNSFDAGKVSAAGNFRRNGIRDISQQQMKNILAGKARNVILKKLDELKESRRKLDEWKAIRKKVDERHPSSILKNTDSEVRVKDTVKAINGVKPGPKAIVDSETNNNSISADSEVLGVSMDVPDPDFHDFDGDRVEDTFGENQVWAAYDDEDGMPRYYAFIHSVVSKKPFQMKISWLSSKTNDELAPIRWIAAGFPKTTGDLRLGKRAISSTLNSFSHKVEWTKGSRGLIHIYPKKGEVWALYRNWSLDWDELTKDQIIHQYDMVEVLGDYNEEHGVNVAPLFKVAGFRTVFRKNADPRKIRNIPRAEMFRFSHKVPSYLLTGQEGDNVPKGCLELDPASTPMELLQLITDDAPKQEDSAEDVPRQEVAEAQEGKVWPENLHVYKRMRFGGKSK* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3325 918 Gene3D DnaJ domain 151 220 IPR036869 -
Tpr3g3325 918 Pfam Domain of unknown function (DUF3444) 643 849 IPR024593 -
Tpr3g3325 918 SUPERFAMILY Chaperone J-domain 143 219 IPR036869 -
Tpr3g3325 918 MobiDBLite consensus disorder prediction 878 893 - -
Tpr3g3325 918 PANTHER HEAT SHOCK PROTEIN-LIKE 89 885 - -
Tpr3g3325 918 PRINTS DnaJ domain signature 156 174 IPR001623 -
Tpr3g3325 918 PRINTS DnaJ domain signature 174 189 IPR001623 -
Tpr3g3325 918 PRINTS DnaJ domain signature 190 210 IPR001623 -
Tpr3g3325 918 ProSiteProfiles dnaJ domain profile. 154 218 IPR001623 -
Tpr3g3325 918 SMART dnaj_3 153 210 IPR001623 -
Tpr3g3325 918 CDD DnaJ 154 207 IPR001623 -
Tpr3g3325 918 PANTHER BNAC03G44070D PROTEIN 89 885 - -
Tpr3g3325 918 Coils Coil 571 591 - -
Tpr3g3325 918 MobiDBLite consensus disorder prediction 877 898 - -
Tpr3g3325 918 Pfam DnaJ domain 154 215 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3325 Tpr-Chr3 36666095 36670009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3325 343 388 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.583 2.62e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3325 - - mtr:MTR_3g099170 1136.71