Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3324 ATGGTTTCAATAAAAGAGAAATTGAAGAAATTTGTGGAACATAGATGGGTGGTGTTTGTGTGTTCAATGTGGGATCTGTCATTTACAGGTACATCATACATGTTTGGAAGTATATCACCAGTCATAAAGAGCAACATGGGTTATAATCAGAAACAAATTGCTTTCTTAAGTGTTGCTAAGGATTTGGGTAGTAACGTTGGACTTGTAGCTGGTTTTATCAGCAAAGTTTGGCCTGTTTGGGGAGTTATGCTTGTTGGTGTTGTTCAGAATGTTGTTGGTTATGGTTTTATTTGGCTTGTTGTTACTCATAGGATTCCTTCTTTGCCTTTATGGATGCTATGTTTTTTCATCCTTATGGGAGCAAATGGAACAACATACTTCAACACAGCAGCATTGGTTTCAAGCTTGCGAAGTTTCCCAGAAAACCGAGGCCCTGTGGTAGGAATATTGAAGGGATTCGTTGGCTTAAGCGCCGCAATATGGACTCAAATTATTGCCATGATCAATCTCCCTGATCAAGCTTCTTTGATTTTCATCATAGCCATTGGACCCGCAATGGTTTCCTTAACCTTCATGTTCATCATAAGACCAGTTCATACTTTGAATAAATCTAGACCCTCTGATGAATCAGGATTCATATTTATCTATAGCATTTGTCTTCTCTTAGCCGCTTACCTTATAGGAGTTTTGTTGCTAGAGAACGTGTTTGATTTGGATCAAAACGTTATCAATTTATTTGCTATCATTTTGATTGTTCTTATATTGCTTCCAATTATAGTTCCTATTCTATTGGTTTTCTTTTCTGAACCGAAAAGTATCGATGAGGAACAACTTCTTCAACCTTCAATGGTTATGCAGAATGAAACTAGTAGTGATAAATCCATTTCTAAACATGTTTTTGAAGATGAGGACAAGTCTTCCAATCTAGAGGTGCCTCCAAGGGATATGATTCAGTTCCAAGCTAGAGTTCTCCAAACAGTAACTTCAGTTGTGAAGAAAATCAAGCAAAAAAATGGGCCTCATAGAGGAGAGGATTTCACCTTAACACAAGCACTTGTAAAGGCTGATTTTCTTCTCATGCTCTTGTCTATCATCTTGGGCTGTGGATCGGGGTTGACAATGATAAACAACATGGGTCAAATTTGTCAATCTTTAGGAGACAACAATGTTAATGTTTACGTATCAGTTATCAGCATATCCAATTTCCTCGGTCGTGTTGGTGGCGGCTACTTCTCTGAGGTTATAGTAAGAAATTTTGGATACCCTCGACTTGTGGCATTGGCAATTATTCAGGCAGTGATGGCTTTGGGACTTTCCTACTATACCATAGGCTTGGTTGGACAAATTTATGTGATAGCAATAACAATGGGTTTTGGGTATGGTGCACATTGGTCAATTGTATTAGCAGCAACTTCAGAAATATTTGGCTTAAAGAATTTTGGGACTATGTACAATTTTCTTACAACTGCTAGCCCAATTGGATCTCTGCTTGTATCTGGTTTAGCGAGCACGTTATACGACTATTACGCAGAGCAGCAAGCAAAGCATAGAAATGATAATGAATTGCTTCTTTGTGAAGGAAACATTTGCTATTCCATAACATGTGGAATTTTAGCAGTAGTTTGCTTGTTTGAAGCTGGTTTGAGCTTGATTATAGTTCAAAGGACTAAGAGGTTTTATTCCCAACTTTATGGAAAGTCTCTAGCTTCATCATAA 1716 0.3782 MVSIKEKLKKFVEHRWVVFVCSMWDLSFTGTSYMFGSISPVIKSNMGYNQKQIAFLSVAKDLGSNVGLVAGFISKVWPVWGVMLVGVVQNVVGYGFIWLVVTHRIPSLPLWMLCFFILMGANGTTYFNTAALVSSLRSFPENRGPVVGILKGFVGLSAAIWTQIIAMINLPDQASLIFIIAIGPAMVSLTFMFIIRPVHTLNKSRPSDESGFIFIYSICLLLAAYLIGVLLLENVFDLDQNVINLFAIILIVLILLPIIVPILLVFFSEPKSIDEEQLLQPSMVMQNETSSDKSISKHVFEDEDKSSNLEVPPRDMIQFQARVLQTVTSVVKKIKQKNGPHRGEDFTLTQALVKADFLLMLLSIILGCGSGLTMINNMGQICQSLGDNNVNVYVSVISISNFLGRVGGGYFSEVIVRNFGYPRLVALAIIQAVMALGLSYYTIGLVGQIYVIAITMGFGYGAHWSIVLAATSEIFGLKNFGTMYNFLTTASPIGSLLVSGLASTLYDYYAEQQAKHRNDNELLLCEGNICYSITCGILAVVCLFEAGLSLIIVQRTKRFYSQLYGKSLASS* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3324 571 Pfam Nodulin-like 15 262 IPR010658 -
Tpr3g3324 571 CDD MFS_Mch1p_like 14 544 - -
Tpr3g3324 571 SUPERFAMILY MFS general substrate transporter 10 558 IPR036259 -
Tpr3g3324 571 Gene3D MFS general substrate transporter like domains 9 203 IPR036259 -
Tpr3g3324 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 568 - -
Tpr3g3324 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 568 - -
Tpr3g3324 571 Gene3D MFS general substrate transporter like domains 204 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3324 Tpr-Chr3 36659361 36663081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3324 3 567 Nodulin-like Gene Family AT5G14120 48.870 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3324 - - gmx:100784744 787.719