Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3302 ATGACGAACATAGATATCATCTCTACGGTGGAACTTAATGTAAAGCAAGGAGAACCAATTCGTGTTCAACCAGCGGAAGAAACAGAAAAGGGACTTTACTTTCTTTCAAACCTCGATCAGAATATCGCGGTTCCAATGCGCACAATTTATTGCTTTAAATCAGAAACAAGAGGAAATGAAAAAGCTGCACAAGTTATTAAGGATGCTTTGTCAAAAATTCTTGTCCCTTATCATCCTATGGCAGGAAAGTTGATTATAAGCACTGAAGGGAAGTTGATTGTGGATAACACAGGGGAAGGTGCAGTTTTTGTTGAGGCTGAAGCAGATTGTAATATAGATGAAATTGGTGACTTAACAAAACCAGATCCTCATAGGCTTGGGAAATTGGTTTATAATACACCAGGTGCTAAAAATATATTAGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGTGGAGGATTCACTTTGGGACTAAACATGATCCATTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGGCTGAAACAGCCAGAGGTTTAGACTTAAAAGTTCAACCATTTCTTGATCGAACCATACTTGAATCGCGCAACCCTCCCAAAATAGAATTCCAACACCACGAATTCGACCAACTAGAAGATCTATCAAACTCTGAAAAAATCTATGAAGGAGAGAAAATCATCCATAAATCCTTCTTTTTCAATCCTGAAAAGCTTGATTCGCTCAAGAAAAAGGCAACAGAAGACGGAGTTTTAAAAAAATGTTCAACTTTTGAAGCACTCTCGGCTTTTGTATGGAGAGCTAGAACTTCAGCTTTAGAAATGCATCCTAATCAACAAACGAAATTACTTTTCGCAGTTGATGGACGGTCGAGATTCGTTCCGCCAATACCAAAGGGATATTTTGGCAATGCTATTGTGCTAACAAATTCTTTGTGTAAAGCAAGTGATTTATTGGAGAATCCTTTTTCATTTTCAGTTGGATTGGTTCACAAGGCAATTGAAATGGTTACAGATAGTTACATGAGATCAGCTATTGATTATTTTGAGGTTACAAGAGCTAGGCCTTCTTTAACCGGAACACTTTTGATTACAACATGGACTAAATTGTCTTTTGACACTACTGATTTTGGTTGGGGTGAACCTTTGTGTTCTGGTCCTGTTACATTGCCAGATAAAGAAGTGATTTTGTTCTTGTCACATGGTCAAGGAAGGAAAGGTATAAGTGTGCTTCTTGGTTTGCCTGATTCTGCTATGAAACGTTTTGAAGAATTGGTGATTAATATGGTGTGA 1311 0.3791 MTNIDIISTVELNVKQGEPIRVQPAEETEKGLYFLSNLDQNIAVPMRTIYCFKSETRGNEKAAQVIKDALSKILVPYHPMAGKLIISTEGKLIVDNTGEGAVFVEAEADCNIDEIGDLTKPDPHRLGKLVYNTPGAKNILEMPLMTVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWAETARGLDLKVQPFLDRTILESRNPPKIEFQHHEFDQLEDLSNSEKIYEGEKIIHKSFFFNPEKLDSLKKKATEDGVLKKCSTFEALSAFVWRARTSALEMHPNQQTKLLFAVDGRSRFVPPIPKGYFGNAIVLTNSLCKASDLLENPFSFSVGLVHKAIEMVTDSYMRSAIDYFEVTRARPSLTGTLLITTWTKLSFDTTDFGWGEPLCSGPVTLPDKEVILFLSHGQGRKGISVLLGLPDSAMKRFEELVINMV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3302 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 432 - -
Tpr3g3302 436 Pfam Transferase family 21 430 - -
Tpr3g3302 436 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 13 432 - -
Tpr3g3302 436 Gene3D - 217 434 IPR023213 -
Tpr3g3302 436 Gene3D - 13 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3302 Tpr-Chr3 36356320 36361443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3302 10 435 Monolignol Biosynthesis Gene Families AT5G48930 34.685 1.07e-84 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3302 K15400 - gmx:100794490 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3302 3 36356320 36361443 Tpr3g3302 3 36356320 36361443 ECH