Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3282 ATGGCAATAATCACTATGCTATTTCTTCATCTAAGTTTTTTCATCTTGAAAGTGTTTTCTTTCCCTTCTCATTCTCATGCAGATAGAATTGTTAACCTTCCTGGACAACCAAACATAAACAACATAGCCTTTCAACAATTCTCAGGATATGTCACAGTTGATAACAAAAAACACAAATCACTCTTTTACTATTTTGCTGAATCAGAAACTGATCCATCTTCAAAACCTCTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTAGGAGTAGGTGCATTCTCAGAAAATGGACCCTTTAGACCAAATGGTGAATTTCTTATAAAAAATGAGCATAGTTGGAATAAAGAGGCAAATATGCTTTATTTAGAGACACCAATTGGAGTTGGATTTTCCTATGCCAAAGGTAGTTCTGCTTATACAACAACAGTGAATGACGAGGAAACAGCAAGGGACAATCTTGTATTCTTGCAACGTTGGTTCAACAAGTTTCCACAATATAGAAACAGAGATTTGTTTCTAACTGGTGAAAGTTATGCAGGTCATTATATTCCTCAACTTGCAAAGCTTATGATTGAAATGAACAAAAGAAACAAGATATTCAATCTTAAAGGCATAGCTTTGGGGAATCCAGTGCTAGAATATGCCACTGATTTCAATTCAAGGGCTGAGTTTTTTTGGTCACATGGACTAATATCAGATGCAACTTATAACATGTTCACTACAGTGTGTAATTACTCACGCTATGTAAGTGAGTACAATAGAGACTCAGTTTCATCACTTTGTTCAAAGGTTATGGGGTTGGTGACTAAAGAAACTAGTAGATTTGTGGATAAATATGATGTCACTCTTGATGTTTGTATTTCCTCTGTGCTGTCACAATCCAAGATTATTTCTCCTCAACCTCAACAAGCAAATGAGATGATAGATGTGTGTGTGGATGACAAGGTTACAAACTACTTAAACAGAAGAGATGTGCAAGAGGCACTTCACGCAAAGCTTGTTGGCGTTCGGAAGTGGGATGTCTGCAGCAATGTTCTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTGTAGTTGGATCATTGATAAAAGCTGGAGTTAGGGTCCTAATTTACAGTGGTGATCAAGATTCAGTGATTCCACTGACTGGAAGCAGAACCTTAGTTCAAAAATTGGGTAGACAATTAGGACTGAATACAACAGTACCTTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAATATTCTCTCATTTGCCACTGTCAGAGGTGCTGCACATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTTGTGCTATTCAAATCATTCTTGGAAGGAAGCCCTTTACCTGAAGTTTTCTGA 1398 0.382 MAIITMLFLHLSFFILKVFSFPSHSHADRIVNLPGQPNINNIAFQQFSGYVTVDNKKHKSLFYYFAESETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNEHSWNKEANMLYLETPIGVGFSYAKGSSAYTTTVNDEETARDNLVFLQRWFNKFPQYRNRDLFLTGESYAGHYIPQLAKLMIEMNKRNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDATYNMFTTVCNYSRYVSEYNRDSVSSLCSKVMGLVTKETSRFVDKYDVTLDVCISSVLSQSKIISPQPQQANEMIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDVLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLGRQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGAAHEAPFSQPERSLVLFKSFLEGSPLPEVF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3282 465 SUPERFAMILY alpha/beta-Hydrolases 40 462 IPR029058 -
Tpr3g3282 465 Pfam Serine carboxypeptidase 41 458 IPR001563 GO:0004185|GO:0006508
Tpr3g3282 465 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Tpr3g3282 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Tpr3g3282 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Tpr3g3282 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Tpr3g3282 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Tpr3g3282 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 463 IPR001563 GO:0004185|GO:0006508
Tpr3g3282 465 PANTHER CARBOXYPEPTIDASE 23 463 - -
Tpr3g3282 465 Gene3D alpha/beta hydrolase 25 462 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3282 Tpr-Chr3 36087863 36091987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3282 321 461 Calmodulin-binding Proteins AT2G22960 29.078 7.21e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3282 K16297 - gmx:100795668 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3282 3 36087863 36091987 Tpr3g3282 3 36087863 36091987 ECH