Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3281 ATGACAAATCACCAACAAAACCAACACCCTCTAACACCAACACCAATCATTAACCAAAACCAGGGTAAAGAGCAGTTGGACTCTGAGGGATCATCGCCTCTAACAGTTACTTCCCGGGTTTTGTATATGTTGGGAGACATCACTGCAGGGCCTGCACATATGTTCACTCAATGGGTTCAATCTGTTCGAAAACGCGCTTCCGATCATCGCTCTTCTGGATTCCCTCGCTCTTCTTCCTCCATCACGCCCTTTTGGTTTGGAGAATCTGCAGAGGATGCAAAAATTGATGACATGCCTGATCAAACTGAAATTAGTTTGTGGGATAGGCTTGGTAAAGCTGAAATGTTGGACATTGAATCGAGTTCCTTTTCTTGGGATATGCTCTCGTCACTTCACCACACTGAGCATACTAGTAGCAATGAACATTCCGAGGATGAAATGAATAGAGCTCTTGAGCTAACCGTAAATTCTGGAGGGGTTGTCTTCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTCCAAAAGAAGCAGCAGCTGTCATAAAGATATCTTCGTCAAGAATGGCAACACAGTCCGAACGTCTCGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAGTTTAGAATGGCTCCAAATAAAAGAAGCTGCAGAAAAAGCAAGGGATGCAGCAAGTTGTGAGAGTGATGCAATTGGTGAAAGGACATGTTCAGAACTTTTGGAAGCACTTGAGCTTAGCCGGTGTCTCTTGTTTATAAGTTATGTACATGGTTCACCTTTGCTTGAAAGCTGTAATGCATTTGAATCACAGGATTCTGCAGAAAAAGTATCAGCAGCCCTTGGCAGGGTAATGATGCTAGATCTTGTTATCAGAAATGAAGATAGGCTTCCATGCCGTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGATAAGACAATCTCTTCAAATTTAGATACAATAGGAGAAGCCTTTGATTTTGAAATGAACCGATATGGGCCCGGGGTGGTTGGGACACTTCAGAAAGAAAGAAGGTCAACTTCAGTAGTTAGCAGATCGAGTTCTCACAATCATGGAATAAAATCACAAGGCTCTCTTCTTTCACAGATAAGTGAATCATCTGATGACTTGTGCCTTAAAAGTCAAAAGTCAGAAGAATCATTGTTTACTGGCTCTAAGATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCCCCTGCTGGAAAACGTGCAGATGATCAGGTCAATTATCCTAAGTTGGTTGAGTTGATACTAAATAGCTCTGAATTTTCCTCTTGCTTGTTATATGATATAACTGGAGGGAAATTAGGAAGTCCTCCCTTAGAAGACATAAATACAACAGTCGATGTACAAGGAAGTGAAGCAGCATCAATAGTTCACGAGTTCCGCAATGGTTTTCGTGCTGCTCTTAGGGATCTGCAAGGATTTCATATATTCCTACTTACACTTCACAAAAAACTTGATAATGTGTTACGATCATTTAATAATACTATAAGCAAAATACCATTGGGGGACTCTGAAAAAGAAGATTCACCGTCACCCGCTGCTGGTAGTTGTCTTTCTCCAACAAGTAAGGAGAGATTTTCTAATGACAGCCATCGAGATTTCAGTGAGACAGATTCACAGAGATCTGCTCCAAGGGCATCACCATCTTCAGGCAATAGAGATTTTTGTGATTCTGCTTCTCCTATGTCAAGAGAAGGTTGGCATGGAAAATCCTCTAAAGGAAGCGCGGAACCATTGCTTGGTTCCCGTTTTACAGCCAAGCTCCGTGACTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACACTGGAATGAAATGCTTAAAAATGATGCTATCAAGTTTTGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGTAGTGATAGCAACACTGTTGTTGATGCATATGAATTGAAGGTTAGACTTGAGCACATCCTTGAAAGGATTACATTGATATCCGAGGCTGCAAATACAGAGAGACCATCTGCTGTTACAAGTAATTTGTTCATCGGTGGAGCACAATCTGCAAGATCTGTATACACAATGCAACACTTGGGAATCACTCATATTTTGTGTTTGTGTACTAATGAAATTGGACAATCAGATTCCCAATTTCCTGATCTGTTTACTTACAAAAATTTCTCGGTGTGTGATACTGAGAATTCTGACATCGGCGTCTTATTTGACGAAGCTTGTGATTTTATAGAAGATGTTGAGAAAGGAGGTCAGAGAGTTTTAGTTCATTGCTTCGAAGGGAAAAGCAGAAGTGTCACTGTGCTCCTTGCTTACTTGATTCTCAGAAAGAATTTCACATTATTAGAAGCATGGAATGCTATGAGAAAAGTTCACCGTCGAGCGCAGCCTAATGATGGTTTTGCAAAGATCTTACAAGAACTTGATAAAAAACTGCACGGGAAAGTTTCGATGGAGTGGCAGCGGCGGAAACCAACAATGAAAGTTTGTCCTATATGTGGCAAGAATGCTGGACTGAGCAGCAGCTCACTTAAGCTACATCTTCAGAAATCTCATAAAAGGCTATCATCAGGGAGTGTTGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATTAGCCGTGGTGGGAGTGTGAGCCCCAAACAAAGGCAAACTCACTCTATGACAGACTAA 2751 0.4148 MTNHQQNQHPLTPTPIINQNQGKEQLDSEGSSPLTVTSRVLYMLGDITAGPAHMFTQWVQSVRKRASDHRSSGFPRSSSSITPFWFGESAEDAKIDDMPDQTEISLWDRLGKAEMLDIESSSFSWDMLSSLHHTEHTSSNEHSEDEMNRALELTVNSGGVVFFALFNVHGSDDASPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWLQIKEAAEKARDAASCESDAIGERTCSELLEALELSRCLLFISYVHGSPLLESCNAFESQDSAEKVSAALGRVMMLDLVIRNEDRLPCRQLRWRGNPANLLLADKTISSNLDTIGEAFDFEMNRYGPGVVGTLQKERRSTSVVSRSSSHNHGIKSQGSLLSQISESSDDLCLKSQKSEESLFTGSKIVAIDSGVPRRPPAGKRADDQVNYPKLVELILNSSEFSSCLLYDITGGKLGSPPLEDINTTVDVQGSEAASIVHEFRNGFRAALRDLQGFHIFLLTLHKKLDNVLRSFNNTISKIPLGDSEKEDSPSPAAGSCLSPTSKERFSNDSHRDFSETDSQRSAPRASPSSGNRDFCDSASPMSREGWHGKSSKGSAEPLLGSRFTAKLRDFHKFAKVDAESYKELEHWNEMLKNDAIKFCQENNFNSGFFEGSDSNTVVDAYELKVRLEHILERITLISEAANTERPSAVTSNLFIGGAQSARSVYTMQHLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDTENSDIGVLFDEACDFIEDVEKGGQRVLVHCFEGKSRSVTVLLAYLILRKNFTLLEAWNAMRKVHRRAQPNDGFAKILQELDKKLHGKVSMEWQRRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKRLSSGSVDSAMTMEIQKALTTLNISRGGSVSPKQRQTHSMTD* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3281 916 ProSiteProfiles Dual specificity protein phosphatase domain profile. 690 835 IPR020422 GO:0006470|GO:0008138
Tpr3g3281 916 MobiDBLite consensus disorder prediction 897 916 - -
Tpr3g3281 916 SUPERFAMILY Protein kinase-like (PK-like) 57 429 IPR011009 -
Tpr3g3281 916 MobiDBLite consensus disorder prediction 361 382 - -
Tpr3g3281 916 Pfam Dual specificity phosphatase, catalytic domain 699 830 IPR000340 GO:0008138|GO:0016311
Tpr3g3281 916 MobiDBLite consensus disorder prediction 549 563 - -
Tpr3g3281 916 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 25 916 - -
Tpr3g3281 916 MobiDBLite consensus disorder prediction 527 579 - -
Tpr3g3281 916 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 690 835 IPR029021 -
Tpr3g3281 916 SMART dsp_5 690 832 IPR020422 GO:0006470|GO:0008138
Tpr3g3281 916 CDD DSP 691 828 - -
Tpr3g3281 916 Gene3D - 272 525 IPR036940 GO:0016301
Tpr3g3281 916 Gene3D Protein tyrosine phosphatase superfamily 673 845 IPR029021 -
Tpr3g3281 916 MobiDBLite consensus disorder prediction 564 579 - -
Tpr3g3281 916 MobiDBLite consensus disorder prediction 1 32 - -
Tpr3g3281 916 Pfam Actin-fragmin kinase, catalytic 103 341 IPR015275 -
Tpr3g3281 916 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 25 916 IPR035010 GO:0004721|GO:0009737|GO:0043622
Tpr3g3281 916 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 759 811 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3281 Tpr-Chr3 36077204 36083541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3281 29 901 Protein tyrosine phosphatase (PTP) family AT5G23720 62.851 0.0 1059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3281 K14165 - gmx:102661225 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3281 3 36077204 36083541 Tpr3g3281 3 36077204 36083541 ECH