Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3279 ATGGTGCCGGTATTTGAGGACTACAAGAGGAAGTTGTTTCCTTATGGAAGTCAAGATACACTTGCATCAATAACAGCACTTGGTTATGTGTTATTCCTATTTGAAACAGGTATAAAAATGGATTTTTGCACGATCATGAGAACGGGAAGAAAAGCATGGGTGATTATGTTTTTCGGGTTAGTAAGCCCTATTATATTTGGTTTTGCTACCCGAAATGTAAAGGGTATGGATGCTTTTAGCAACAGTCCCCTTGAAGGAAATATAATAATGATAGGACACAATACAACTTCATTCGCCGTGGTTGTTGCTCTTTTAAATGACCTTAAACTTCTAAACTCCGAACTTGGACGATTAGCATTATCTGTTTCTTTGATTGGTGACCTATTGAGTAACATTTTTATAACTATATCCTCAACTATGGTGAGTTCGAGTGATCATATTTCATTTGGCATGAGATTAGGATCTTTATTCGGCATAGCTATCTTCGTTCTGTTCATCTATCGTCCCGCAATGTTTTGGGTTGTTGAACACACTCCTGAAGGAAAAGAAGTTAAGGATATTTATGTCAACATTGTTATTGGGATTCTATTTAGTTTGTGTTGGTTTTCAGGATACCTAGAAAGAGGACCTGTCTTTTTACCGTTTATTTTTGGATTGGCTACACCAGAAGGACCTCCATTAGGATCTACATTGATTAAAAGAATTCATTTGTTAGGCCTAAAATTGTTTTTGCCAATTTTTATGACTACTAGTACAATGAAAGTAGAATATGGCTTTTGGAATTCATCATCAACATCGACACTTGATGTATTTTTGTATGTTCTATTTTTGGGTTATTTTGTCAGAATGGTAGCATGTTTTATATGTTCACTCTTTTTCAACATGCCTCCAAAGGATGCTATCACTCTTTCCTTGCTTTTGAACTGCAAAGGTGTTGTGCAAGTAACCATGTACTCTACTGCATTGGATAGAAATGATATCCTTTCCCATACACATTGTGTGATTATACTGATAATCATGGTTTCAATCTGCATAACTCATTTGCTGGTAAAACGTTTGTATGATCCTTCAAGAAAATATGCTGGCTACGAAAAGAGGAACTTATTCAGTTTGAAACACAACTCAGAATGGAAGATACTAGTTGTCATTCATAAACAACATCATGTAACTCCTATTACGGAAGTAATCGATCTATGTCACCCTATAGCCGAACGTCCTATCACCGTAGACGCGTTGCATTTAATCGAGTTAGTTGGAAGATCCTCACCTATTTTCATTTCTCACAAGAAGAAAAAAGTTGTTGCTTTAAACTTACATGACTCTTACTCTGATAATGTTGTTCTTAATCTCAAACTATATGAACATGATAAACTAGGTGCAGCAATAATAAACCCTTACACTGCCATATCTCCACTTAATTTGATGCATGAAGATGTTTGTCACTTAGCATTTGACAAACTTTCATCAATTATAATCCTTCCTTTTCATAAAAAATGGTTTAGTGATGGTAAGCTTGAATATGAAGACAAGAATATAAGGTCTTTAAACTGCTCAGTCTTGGAAAGATCTCCATGCTCAGTTGGAATCCTAGTGACTCGTGGTATTCGTCAAACGGATTCATTATTTCGATTAGCTTTAGTATTTTTAGGTGGAAGAGATGATAGAGAGGCATTATGTTTGGCGAATCGGGCAGCGCAAGACCCTAATGTTGAGCTTGTGATATATCACATTGTAGACAAGAAGAGAACTTCAGAGGACATGGAAAATTTGGAAACAAGGTTGGATATAGCAATGTTAAAAGATAGTAAGATATCACACTCTGGATTGGGAAATGTAGCATATGAAGTAATTGAAGTTGAGGGTGGATCACAAACAATTGATGTTCTTAGACAAATGGGAGAAGAACATGATTTTATTATAGTTGGGAGAAGACATGGAATCAAATCTCCACAGACATATGGGCTTCAAGAATGGAGTGAGTTTCCTGAGTTAGGTCCTGTTGGAGATATTTTGGCTTCATCTGATCTTGATTGTAAAGCTTCTGTTTTAGTTGTGCAGCAACAACAACAAATATGCATGTAG 2082 0.3598 MVPVFEDYKRKLFPYGSQDTLASITALGYVLFLFETGIKMDFCTIMRTGRKAWVIMFFGLVSPIIFGFATRNVKGMDAFSNSPLEGNIIMIGHNTTSFAVVVALLNDLKLLNSELGRLALSVSLIGDLLSNIFITISSTMVSSSDHISFGMRLGSLFGIAIFVLFIYRPAMFWVVEHTPEGKEVKDIYVNIVIGILFSLCWFSGYLERGPVFLPFIFGLATPEGPPLGSTLIKRIHLLGLKLFLPIFMTTSTMKVEYGFWNSSSTSTLDVFLYVLFLGYFVRMVACFICSLFFNMPPKDAITLSLLLNCKGVVQVTMYSTALDRNDILSHTHCVIILIIMVSICITHLLVKRLYDPSRKYAGYEKRNLFSLKHNSEWKILVVIHKQHHVTPITEVIDLCHPIAERPITVDALHLIELVGRSSPIFISHKKKKVVALNLHDSYSDNVVLNLKLYEHDKLGAAIINPYTAISPLNLMHEDVCHLAFDKLSSIIILPFHKKWFSDGKLEYEDKNIRSLNCSVLERSPCSVGILVTRGIRQTDSLFRLALVFLGGRDDREALCLANRAAQDPNVELVIYHIVDKKRTSEDMENLETRLDIAMLKDSKISHSGLGNVAYEVIEVEGGSQTIDVLRQMGEEHDFIIVGRRHGIKSPQTYGLQEWSEFPELGPVGDILASSDLDCKASVLVVQQQQQICM* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3279 693 Gene3D - 10 361 IPR038770 -
Tpr3g3279 693 Coils Coil 580 600 - -
Tpr3g3279 693 PANTHER CATION/H+ EXCHANGER 3 2 691 - -
Tpr3g3279 693 PANTHER CATION/H + ANTIPORTER 2 691 - -
Tpr3g3279 693 Pfam Sodium/hydrogen exchanger family 20 349 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3279 Tpr-Chr3 36061295 36063677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3279 6 689 Antiporter Super Family AT5G22900 35.479 2.67e-138 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3279 - - mtr:MTR_3g498715 1012.29