Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3266 ATGGATCCTGACGCATTCACCGCTAGTTTATTCAAGTGGGACCCACGTAACGTTCTTTCAACTGCACCACCTCCTCGTCCTTCCCAACTCCTGGACTATACGGTTGCACCTTCAGCTGCTCCGATGAGTTATCATCCTGCTAGGTTACCAAGGGAGCTTGGTGGTTTGGAGGAACTGTTTCAAGCTTATGGTATAAGATACTACACGGCGGCGAAGATAGCTGAGCTTGGTTTCACGGTGAGTACTCTGGTGGATATGAAGGATGATGAGTTGGATGATATGATGAACAGTTTATCGCAGATTTTTCGTTGGGATCTTCTTGTTGGTGAAAGATATGGAATCAAAGCTGCCATTAGAGCTGAAAGAAGAAGACTTGATGAAGAGGAAATGAAACGCCGTGGTCTTCTCTCCGGTGATACCACCAACACTCTCGACGCTCTTTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAGCGAGAAAAGGAAGCGGTAGGGAGTGGAGGAGGGAGTACATGGGAGGTAGCTGTGGTGGAGGAGAGGAGAAAGAGGCAGCAGATAAGGAGGAGGAGGATGAAGATGAAGGGAAATCTTGATCATGGTGAGAATGAAGAGGGAGAAGAGGAAGATGAAGACAATAACAGTGGTGGTTGTGGTGGTGAGAGACAAAGAGAACATCCATTCATTGTAACAGAGCCAGGGGAAGTTGCACGTGGCAAAAAGAATGGTCTAGATTATCTCTTTCATCTCTATGAACAATGCCGTGAGTTTCTGATTCAAGTTCAAGCCATTGCCAAAGAACGCGGTGAGAAATGTCCTACAAAGGTAACAAATCAGGTATTTAGGTACGCGAAGAAAGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCATTGCATTGTTTAGATGAGGAAGTTTCCAATGAGCTGAGAAGGGGTTTCAAGGAAAGAGGCGAGAACGTTGGCGCGTGGAGGCAAGCTTGTTACAAGCCACTAGTGGCGATCGCTGCACGTCAAGGATGGGATATTGATGCAATATTCAACGCACATCCGCGTCTTTCCATATGGTACGTGCCAACAAAACTCCGTCAGCTTTGTCATGCTGAGAGAAACGGTACTGCTGCTTCGAGCTCCGTCTCTGTTGGAAGGACCAACCTTCCTTTCTAA 1188 0.4714 MDPDAFTASLFKWDPRNVLSTAPPPRPSQLLDYTVAPSAAPMSYHPARLPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERRRLDEEEMKRRGLLSGDTTNTLDALSQEGLSEEPVVQREKEAVGSGGGSTWEVAVVEERRKRQQIRRRRMKMKGNLDHGENEEGEEEDEDNNSGGCGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNGTAASSSVSVGRTNLPF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3266 395 Pfam Floricaula / Leafy protein SAM domain 52 129 IPR035079 -
Tpr3g3266 395 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 215 381 IPR035209 GO:0003677
Tpr3g3266 395 MobiDBLite consensus disorder prediction 148 170 - -
Tpr3g3266 395 Gene3D Protein LEAFY 218 387 IPR038276 -
Tpr3g3266 395 PANTHER PROTEIN LEAFY 1 394 IPR002910 GO:0003677|GO:0006355
Tpr3g3266 395 MobiDBLite consensus disorder prediction 186 222 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3266 1 389 Orphan Transcription Factor Family AT5G61850 64.792 5.54e-159 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Tpr3g3266 C_LFY_FLO 2.9e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3266 - - gmx:100798196 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3266 3 35945189 35948521 Tpr3g3266 3 35945189 35948521 ECH