Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3242 ATGTCGATTTCGAAAACGACGACACAACCAAAACCCACACAGGTTCTCCCTTATGCAACTGAGGATCTTCTTGAAATCTACACCTTGGGTAGAAAATTGGGTGAGGGTCAATTTGCTACTACATATCTCTGCACACACAATACAACAGGTAGAACCTATGCTTGCAAATCAAATCCAAAGAAGAATCTTTTATGCAAAGGAGTAGATTATGATGATGTGTTGAGAGAGATTCAAATAATGCAACATTTATCTCAACACCCAAAAGTTGTGAAGATTCATGATACCTATGAAGATTCATGTTATGTTGACTTGGTTATGGAGTTTTGTGAAGGTGGTAATTTGTATGATAGGATTAAGCAGAAGGGACATTATAGTGAGCAACAAGCTGCTAAATTGGTTAAAAATATTGTTGAGGCTGTTCAAGATTGTCATTCTCTTGGTGTTATGCATAGAGACCTTAAACCTGAGAACCTTGTGTTTGATACTGTTGAAGATGATGCTAATCTCAAAATTATTGATTTTGGATCGTCTGTTTTTTATAAGTCAGGTGAAACTTGTAGTGCTATTGTTGGAACCCCGGACTATATGGCACCAGAGGTCTTGCTCGAGCATTATGGACCTGAAGCTGACTTGTGGAGTGTCGGGGTTATTTTGTACATCTTATTAAGCGGGGTGCCACCATTTTGGGCCGAGACCGAGGAGGGCACCTTCATACAGATTTTGCAGGGAATACTTGATTTCCAATCTGAGCCATGGCCTACAATTTCAGATAGCGCCAAGGATCTAATTCAAAAAATGCTTGATATGAATCCGAAAAAAAGGTTTACGGCACAACAAGTGTTATGTCACCCATGGATTGTCGATAATAACATTGCACCAAATAAACAAGGTCGGGCCGGAGTCCAGACAAGCTGGGCTATGATCCAAGACCTCAACATCTTTAGGGCCTCGAAAATTTGTAATTTTATTAAGTCCATCATTCAAACGATATGTTAA 996 0.3946 MSISKTTTQPKPTQVLPYATEDLLEIYTLGRKLGEGQFATTYLCTHNTTGRTYACKSNPKKNLLCKGVDYDDVLREIQIMQHLSQHPKVVKIHDTYEDSCYVDLVMEFCEGGNLYDRIKQKGHYSEQQAAKLVKNIVEAVQDCHSLGVMHRDLKPENLVFDTVEDDANLKIIDFGSSVFYKSGETCSAIVGTPDYMAPEVLLEHYGPEADLWSVGVILYILLSGVPPFWAETEEGTFIQILQGILDFQSEPWPTISDSAKDLIQKMLDMNPKKRFTAQQVLCHPWIVDNNIAPNKQGRAGVQTSWAMIQDLNIFRASKICNFIKSIIQTIC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3242 331 Gene3D Transferase(Phosphotransferase) domain 1 115 324 - -
Tpr3g3242 331 CDD STKc_CAMK 27 285 - -
Tpr3g3242 331 PANTHER CDPK-RELATED KINASE 6 301 - -
Tpr3g3242 331 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 301 - -
Tpr3g3242 331 SUPERFAMILY Protein kinase-like (PK-like) 15 297 IPR011009 -
Tpr3g3242 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Tpr3g3242 331 Gene3D Phosphorylase Kinase; domain 1 29 114 - -
Tpr3g3242 331 ProSiteProfiles Protein kinase domain profile. 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3242 331 SMART serkin_6 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3242 331 Pfam Protein kinase domain 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3242 331 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3242 Tpr-Chr3 35727795 35729150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3242 8 312 EF-hand Containing Proteins AT1G35670 61.165 8.08e-138 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr3g3242 Pkinase 1.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3242 K13412 - gmx:100790443 451.825