Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3241 ATGTCTATTTCAAGCGCCGCACCACCAAAACCCACCCAGGTTCTCCCTTATGCAACAAAGGATCTTCATGAAGTCTACACCTTGGGTACAAAATTGGGTCAGGGTCAATTTGCTACTACATATCTATGCACACACAACACAACAGGTGAAACCTACGCTTGCAAATCAATTCCAAAGAACAAACTTTTGTTCAAAGAGGATTATGATTGTGTGTGGAGAGAGATTCGAATAATGCAACATTTATCTGAACTCCCAAAAATTGTGAAGTTCCATGATGCCTATGAAGATTCATTTTTTGTTCATTTGGTTATGGAGCTTTGTGAAGGTGGTGAGTTGTTTGATAGGATCGTGCAGAAGGGATATTATAGTGAGCAACAAGCTGTTAAGTTGGTTAAAAATATTGTTGAGGCTGTTCAAGATTGTCATTCTCTTGGTGTTATGCATAGAGACCTTAAACCTGAGAACCTTGTGTTTGATACTGTTGAAGATGATGCTGATCTCAAAATTGTTGATTTTGGGTTGTCTGTTTTTTATAAGCCAGGTGAAATCTTTAGTGATGTTGTTGGAAGCCCGTACTATATTGCACCAGAGGTCTTGAACAAGCATTATGGACCTGAAGCTGACTTGTGGAGTGTCGGGGTTATTTCCTACATCATATTAAGCGGAGTTCCACCATTTTGTGCCGAGACCGAGAAGGGGATCTTTGCACAAATTTTGCATGGAATACTTGATTTCCAGTCCGAGCCATGGCCTGTGATTTCAGACAGCGCCAAGGATCTAATTCGAAAAATGCTTGATAGGAATCCGGGAAAAAGGTTTACGGCACACCAAGTGCTCAGTCATCCATGGATTGTTGATGATAACATTGCACCAAATAAGCCTCTTGGGGTCTGA 894 0.4094 MSISSAAPPKPTQVLPYATKDLHEVYTLGTKLGQGQFATTYLCTHNTTGETYACKSIPKNKLLFKEDYDCVWREIRIMQHLSELPKIVKFHDAYEDSFFVHLVMELCEGGELFDRIVQKGYYSEQQAVKLVKNIVEAVQDCHSLGVMHRDLKPENLVFDTVEDDADLKIVDFGLSVFYKPGEIFSDVVGSPYYIAPEVLNKHYGPEADLWSVGVISYIILSGVPPFCAETEKGIFAQILHGILDFQSEPWPVISDSAKDLIRKMLDRNPGKRFTAHQVLSHPWIVDDNIAPNKPLGV* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3241 297 SUPERFAMILY Protein kinase-like (PK-like) 26 289 IPR011009 -
Tpr3g3241 297 Pfam Protein kinase domain 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3241 297 PIRSF ILK 3 289 - -
Tpr3g3241 297 PANTHER CDPK-RELATED KINASE 5 295 - -
Tpr3g3241 297 SMART serkin_6 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3241 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3241 297 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Tpr3g3241 297 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 295 - -
Tpr3g3241 297 CDD STKc_CAMK 25 283 - -
Tpr3g3241 297 Gene3D Transferase(Phosphotransferase) domain 1 113 293 - -
Tpr3g3241 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Tpr3g3241 297 Gene3D Phosphorylase Kinase; domain 1 28 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3241 Tpr-Chr3 35723870 35726035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3241 8 295 EF-hand Containing Proteins AT1G35670 67.474 8.85e-146 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr3g3241 Pkinase 5.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3241 K13412 - gmx:100790443 475.322