Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3237 ATGGATAAGTGGGGTGTTAATCATCAACAGGCATTCATTGGTTGGCGTGGGAAAAGAGGAAGAAATTTTTCTGCTGTTACTAATGCGCAAGAGGAATCAGACAACGATGAAGAGAAAGAACAAGAAGTAACTATTAAAAATGAACCTATTTTTTTTCCAGATATTAGGAAAAGGAAGTGCCTCAGCCTTAGTCAGCTTAGAGAGGGGAAAGAGGAGTCGTCTGGGATGCTTGGTCAGCTTAGTGAAGTGAAAGTAGAGTCTTGTGAGAAGTTTATTCCGCTTAGAGAGGTGAAAGAGGAGTATTGTGGCATGGAAAGCAGTAGCAAGAATAAGAGAACGAAGCCTGTTGTTAAGGACAGATGGTCAAGCGAGAGGTACAAGTTGGCTGAGCAAACCATGTGGGAAGTTTTGAAGGCAGAAGGTGCGACTTTTGAAAATCCGATAACCCGACCTGCACTAAGAGCAGCTGCCCGTAAATTCATTGGTGATACTGGACTTTTAGACCACTTACTGAAGCACCTTAGTGGTAAAGTGGCCCCTGGAGGCACTGATCGGTTCCGAAGATGGCACAACACCGAGGGAGTCATGGAGTATTGGTTGGAGAGGGCTGACTTGGATAAGGTCCGCCAGGAGGCTGGAGTGCGTGACTGCTACTGGGTACCACATTCCGCTGATAGGGCAATCCTTGCCCCTTATCAGGATACTGATTCTTCTGGTGAATTGGAACTGCTTAAAAAAGAAATGGCTCAAATGAAGAAAGATATGCAGGAGCTCATTGCCAAGAAGGAAAAGAAAATTGAAAGTAACTTGATGGAGGAGACTTGCAAGGAATTTGGGAAGTGGAAAGCTATAACTGATCATCGCCTTACTGAAATCATGGCTTCTGTGAAGAATTTGCAGGGAAATTATGGTGAATTGATGAATTGGAAAACTGAAGTGGAGAAACATCTTATGGATATAACAGAAAAATTGAACGATCTTCAAGCAGCAAGAGAATGCACCACTTTTAGTCCTCCTTCAGACAAATGGAAAGAATGGTTAGCAGGCCCTAACCCAAATAATTTTCAGGAGGATGATGCATTGGCAACTTGGATTGGGAGTTCAGAGCCGCTTAATGTTCCACAAGAGTGTTTGCCTGAATATCCCTGCGCAGGCATGCTAACTCAGCCACTCAATGAAGAACCCACTAACAAGAAGAGTGATGCTGAGGAGCTGATGCCCACAATGCAAGAGGATCAAAATAATGTCACCCCAGATTCATCTACAACTGTTAATTCAAAGGCAGACATTGACAACTCATTGATAATGTTTCAGGAGATGTTTATGGATTTATTCAAATGGAAAGAAAAAATGGAGCAGCAGCTGCTGGATGTATCAAACACTGTATATGGCATGCTAGCAATGAAGTAG 1410 0.4312 MDKWGVNHQQAFIGWRGKRGRNFSAVTNAQEESDNDEEKEQEVTIKNEPIFFPDIRKRKCLSLSQLREGKEESSGMLGQLSEVKVESCEKFIPLREVKEEYCGMESSSKNKRTKPVVKDRWSSERYKLAEQTMWEVLKAEGATFENPITRPALRAAARKFIGDTGLLDHLLKHLSGKVAPGGTDRFRRWHNTEGVMEYWLERADLDKVRQEAGVRDCYWVPHSADRAILAPYQDTDSSGELELLKKEMAQMKKDMQELIAKKEKKIESNLMEETCKEFGKWKAITDHRLTEIMASVKNLQGNYGELMNWKTEVEKHLMDITEKLNDLQAARECTTFSPPSDKWKEWLAGPNPNNFQEDDALATWIGSSEPLNVPQECLPEYPCAGMLTQPLNEEPTNKKSDAEELMPTMQEDQNNVTPDSSTTVNSKADIDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3237 469 PANTHER PROTEIN DYAD 3 468 IPR044221 GO:0007131|GO:0051177|GO:0051321
Tpr3g3237 469 PANTHER DYAD PROTEIN 3 468 - -
Tpr3g3237 469 Coils Coil 241 268 - -
Tpr3g3237 469 Coils Coil 310 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3237 Tpr-Chr3 35662787 35666806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3237 15 201 PHD Transcription Factor Family AT5G22260 28.788 2.90e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3237 - - gmx:100806484 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3237 3 35662787 35666806 Tpr3g3237 3 35662787 35666806 ECH