Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3236 ATGTCGACTTTTCACGTCGGCGGCAAGGTCGTAGACAGAGTTGATTTGCTTAGGAAGAAACACTGGCCATGGCGCTTAGATATTTGGCCTTTCGCTATTCTATACGGCGCGTGGGCTTCAACTATTGTTCCAAGCCTCGATTTCGTTGATGCTTGTATTGTTTTAGGTGCACTCGCTTCTTTTCACATTCTCGTGTGTCTCTTCACCGCTTGGTCCGTTGATTTCAAATGCTTTGCGTATTATAGCAAGGTTAAAAATATTGATCAGGCTGATTCGTGCAAGATTACTCCGGCGAAATTTTGCGGTTCTAAAGAAGTTGTGCCGCTCAATTATCGAAAACCATCTGCAGGTTCTTCATTAGCAGTGGATCTGGAAGAGGTTTACTTTGATTTTAGAAAACAATGTTTTGTTTATTCAAAGGAGAAGGGGACTTTTTGCAAACTTTCTTACCCTACCAAGGAAACATTTCAATATTATGTCAAGAGTACTGGTCATGGCTCCGAAGCCAAAGTTCTTGCTGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAACCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAACCTTTTTTCGTATTTCAGGTTTTCTGTGTTGGTCTCTGGTGTTTGGATGAATATTGGTATTATAGTTTGTTTACTCTATTTATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAGGACTCTGACTGAGTTAAGACGTGTTAGAGTGGATAATCAGATCGTAATGGTTCATCGTTGTGGCAAGTGGGTAAAAATCTCTGGTACAGACCTTTTGCCTGGAGATGTTGTTTCTATAGGCCGCTCTTCTGGTCAGAATGGAGAGGAAAAATCTGTACCTGCAGACATGCTTATTTTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGATTTCTATCGCGGGTAGAGGTATGGAGGAGAAGTTGTCAGCAAAGCGAGATAAAACCCATGTTTTATTTGGTGGAACTAAAATATTGCAGCACTCTCCAGATAAGACCTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTGCGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTTTAATTGCGGCAGGTTATGTGCTTATTAAGGGGCTAGAAGACCCCACAAGGAGCAAGTATAAACTTATACTAAGTTGTTCTCTTATTGTTACTTCTGTGATACCTCCCGAGCTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCACTGGCTCGCCGTGGAATTTTTTGCACAGAACCTTTCCGGATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTTACATCTGATGATATGGAATTTTCTGGAGTTGTTGGCTTGACAGAAACTACAGATTTGGAATCTGACATGAGTAGAGTGCCTATACGAACACTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAACTGGTTGGAGATCCTCTTGAGAAGGCTGCACTTAAAGGAATCGATTGGAGTTATAAATCTGATGAGAAGGCCATTCCTAAAAGGGGAAATGGCCATCCTGTCCAAATTGTTCAGCGGTATCATTTTGCATCTCACTTAAAACGAATGGCAGTTGTTGTTCGTATTCAGGAAGAATTTTTTGCATTTGTGAAGGGTGCCCCAGAAATTATACAAGATAGGCTCATTAATGTACCTCCAGCATATGTTGAGACCTACAAAAGATATACACGTCAAGGGTCTCGTGTTCTTGCTCTGGCTCACAAGTCTCTTCCTGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATGGTGGAGAGTGAACTTACTTTTGCTGGTTTTGTGGTGTTTAATTGTCCCATAAGATCAGATTCTGCTACTGTTTTAGCTGGATTGAAAGAATCTTCACATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACGGCCTGTCATGTCGCTAGCCAAGTTAATATTATATCAAAACCAACATTAATCCTTAGTCCAGCAAGTAATGGTGAAGGATATAATTGGGTGTCCCCTGATGAGCGTGAGAACATTCCCTACAGTGGGAAAGAGGTAGAATTTTTGTCAGAGACTCATGATCTATGTGTTGGCGGTGATTGCTTTGAGATGTTGCAACAGACATCAGCTCATCTTCTAGTCATTCCTTATGTGAAGGTTTTTGCTCGAGTTGCTCCTGATCAAAAGGAACTTATCTTGACCACTTTCAAAACAGTGGGACGGGTAACATTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTCTGAAACAGGCCCATGTAGGAGTTGCTCTTCTGAATGCAATACCTCCAACTCAAGGTGGAAAGTCCTCTTCAGAAGCATCTGGGGAAGACAGTTCAAAATCTGCTAAGCAAAATAAATCATCTAAGCCTGCGCTGGAAACATCTGGAAAGACGATTATCCCACATGGAGAAGGCACATCAAGAGCCAGAGGTGCTTCACAATTAGACTCTGCCAGCATTCAAAGAGCCAGAGTTGCTATACCATCAGACTCCACCAGCAATTCATCTGGTAACCGTCATCTAACTGCTGCTGAGAATCAAAGACAGAGGCTTCAGAGGATGATGGATGAGCTTAACGAGGAAGGAGATGGCCGAGCACCCATTGTGAAGCTTGGTGATGCCTCGATGGCATCCCCATTCACTGCTAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGACAAGGCCGAAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTTGGCCTCAACTGCCTTTCTACTGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTCAAGCTAGGTGATGTACAAGCCACAATAAGTGGTGTATTCACTGCTGCATTTTTCCTCTTTATCTCACATGCACGCCCTCTTCCCACTCTCTCAGCTGAACGTCCCCACCCCAACATCTTCTGTGCTTATGTCTTGCTTTCCCTCTTGGGACAATTTACTGTTCACCTGTTTTTTCTGATATCATCTGTCAAAGCAGCTGAAAAATACATGCCAGAGGAATGTATTGAACCAGATGCAGGTTTTCATCCCAACCTGGTTAATACCGTTTCCTACATGGTGAGCATGATGATCCAGGTGGCCACATTTGCTGTAAACTATATGGGCCATCCCTTCAACCAAAGTATTTCTGAAAACAGGCCATTCATGTATGCCCTCGTTGCTGCTGTTGGTTTCTTTACTGTGATAACATCCGATATCTTCAGGGATTTGAATGACTGGTTGAAGTTGGTGCCGTTGCCAGTGGGTTTGAGGAATAATCTATTGATTTGGGCTTTTCAAATGTTTTTTGTATGCTATTCATGGGAGAGAATGTTGAGGTGGGCCTTTCCCGGTAAAGTCCCAGCTTGGAAGAGGCGACAACAGGTTGCTGTATCTACTTTAGAAAAGAAGAAAGAGCTCTAA 3624 0.4266 MSTFHVGGKVVDRVDLLRKKHWPWRLDIWPFAILYGAWASTIVPSLDFVDACIVLGALASFHILVCLFTAWSVDFKCFAYYSKVKNIDQADSCKITPAKFCGSKEVVPLNYRKPSAGSSLAVDLEEVYFDFRKQCFVYSKEKGTFCKLSYPTKETFQYYVKSTGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLRTLTELRRVRVDNQIVMVHRCGKWVKISGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKISIAGRGMEEKLSAKRDKTHVLFGGTKILQHSPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLTETTDLESDMSRVPIRTLEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAIPKRGNGHPVQIVQRYHFASHLKRMAVVVRIQEEFFAFVKGAPEIIQDRLINVPPAYVETYKRYTRQGSRVLALAHKSLPDMTVSEARSLDRDMVESELTFAGFVVFNCPIRSDSATVLAGLKESSHDLVMITGDQALTACHVASQVNIISKPTLILSPASNGEGYNWVSPDERENIPYSGKEVEFLSETHDLCVGGDCFEMLQQTSAHLLVIPYVKVFARVAPDQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAIPPTQGGKSSSEASGEDSSKSAKQNKSSKPALETSGKTIIPHGEGTSRARGASQLDSASIQRARVAIPSDSTSNSSGNRHLTAAENQRQRLQRMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLSTAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVLLSLLGQFTVHLFFLISSVKAAEKYMPEECIEPDAGFHPNLVNTVSYMVSMMIQVATFAVNYMGHPFNQSISENRPFMYALVAAVGFFTVITSDIFRDLNDWLKLVPLPVGLRNNLLIWAFQMFFVCYSWERMLRWAFPGKVPAWKRRQQVAVSTLEKKKEL* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3236 1207 SFLD p-type atpase 469 970 IPR044492 -
Tpr3g3236 1207 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Tpr3g3236 1207 Gene3D - 483 668 IPR023299 GO:0000166
Tpr3g3236 1207 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 40 1164 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Tpr3g3236 1207 SUPERFAMILY HAD-like 483 834 IPR036412 -
Tpr3g3236 1207 MobiDBLite consensus disorder prediction 833 892 - -
Tpr3g3236 1207 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Tpr3g3236 1207 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Tpr3g3236 1207 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1198 - -
Tpr3g3236 1207 Pfam E1-E2 ATPase 256 468 - -
Tpr3g3236 1207 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Tpr3g3236 1207 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Tpr3g3236 1207 Gene3D - 226 388 - -
Tpr3g3236 1207 SFLD C1.7: P-type atpase like 469 970 - -
Tpr3g3236 1207 MobiDBLite consensus disorder prediction 834 865 - -
Tpr3g3236 1207 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 1184 IPR023298 -
Tpr3g3236 1207 Coils Coil 912 932 - -
Tpr3g3236 1207 Gene3D - 669 845 IPR023214 -
Tpr3g3236 1207 PANTHER CATION-TRANSPORTING ATPASE 1 1198 - -
Tpr3g3236 1207 CDD P-type_ATPase_cation 170 1122 - -
Tpr3g3236 1207 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Tpr3g3236 1207 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Tpr3g3236 1207 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Tpr3g3236 1207 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Tpr3g3236 1207 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 511 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3236 1 1207 Primary Pumps ATPases AT5G23630 76.116 0.0 1906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3236 K14950 - gmx:100789385 2113.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3236 3 35645043 35659470 Tpr3g3236 3 35645043 35659470 ECH