Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3230 ATGAAGATCATGAAATCACTTGCCCTGTTTATCTTGCTTCTCACTGTCTTTGCTTCACAAACTGTGGTGCAGACAGAGGCAAGAGTGTGTGAATCACAGAGCCATGGATACAAAGGTCCATGTTCTGGTGACCACAACTGTGCACTTGTTTGCTGGAATGAAGGTTTCTCTGGCGGAAGATGCAGAGGATTTCGCCATCGTTGCTTTTGCACCAAGCTTTGTTAA 225 0.4533 MKIMKSLALFILLLTVFASQTVVQTEARVCESQSHGYKGPCSGDHNCALVCWNEGFSGGRCRGFRHRCFCTKLC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3230 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Tpr3g3230 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Tpr3g3230 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Tpr3g3230 74 CDD Knot1 39 71 IPR003614 GO:0006952
Tpr3g3230 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Tpr3g3230 74 PANTHER DEFENSIN-LIKE PROTEIN 1 6 74 - -
Tpr3g3230 74 Gene3D - 22 74 IPR036574 -
Tpr3g3230 74 PANTHER DEFENSIN-LIKE PROTEIN 6 74 - -
Tpr3g3230 74 SMART gth_4 29 74 IPR003614 GO:0006952
Tpr3g3230 74 Pfam Gamma-thionin family 28 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3230 Tpr-Chr3 35470120 35470597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3230 5 74 Plant Defensins Gene Families AT5G63660 57.143 2.10e-26 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3230 - - lang:109326357 108.227