Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3227 ATGGACAAGTACGAGGCTGTTAAGGATTTGGGTTCTGGCAATTTTGGTGTTGCTAGGCTTATGAGGAACAAAGTTACAAAGGAACTTGTCGCCATGAAATACATCGAACGTGGTCACAAGATTGATGAGAACGTTGCAAGGGAGATCATGAATCATAGGTCTCTTCGGCATCCGAATATAATTCGGTTTAAGGAGGTGATTTTGACTCCAACACATTTAGCAATAGTTATGGAGTATGCAGCTGGAGGAGAGCTCTTTGAGAGGATATGCAATGCTGGCAGGTTCAGTGAAGATGAGGCCAGGTACTTCTTTCAGCAGCTGATCTCAGGTGTCCATTTCTGTCATACCATGCAAATATGCCACAGAGATCTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCTGCACCCCGCTTAAAAATCTGTGACTTTGGTTATTCAAAGTCATCTTTGCTCCATTCACGGCCCAAATCAACTGTTGGAACACCGGCGTATATAGCACCAGAGGTTCTTTCTAGGCGGGAGTATGATGGAAAGATGGCTGATGTTTGGTCATGTGGGGTGACTCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAAAAATTTTAGGAAAACAATCCAGCGTATCATGGCCATTCAATACAAAATTCCTGATTATGTTCACATATCTCAAGATTGTAGACACCTTATCTCTCGTATATTTGTTGCAAATCCATTGAGGAGAATCTCTATTAAGGAAATCAAGAGCCACCCATGGTTTTTAAAGAATCTCCCCAGGGAGCTGACAGAATCAGCTCAAGCTATGTATTACCAGAGAGAAAATCCAAGCTTTCATCTACAAAGCGTGGATGACGTAATGAAAATCGTTGGAGAGGCAAGAAACCCGCCTCCAGTATCTAGGCCCGTCAAAGGTTTTGGCTGGGATGGGGAAGAAGATGAAGCGGCAGAAGAGTTGGAAGCAGAATTGGAGGAAGAGGATGATGAAGAAGATGAGTATGATAAAAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTCCATATTAGTTAA 1068 0.4288 MDKYEAVKDLGSGNFGVARLMRNKVTKELVAMKYIERGHKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTIQRIMAIQYKIPDYVHISQDCRHLISRIFVANPLRRISIKEIKSHPWFLKNLPRELTESAQAMYYQRENPSFHLQSVDDVMKIVGEARNPPPVSRPVKGFGWDGEEDEAAEELEAELEEEDDEEDEYDKRVKEVHASGEFHIS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3227 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Tpr3g3227 355 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 349 - -
Tpr3g3227 355 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3227 355 MobiDBLite consensus disorder prediction 317 339 - -
Tpr3g3227 355 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3227 355 PANTHER SERINE/THREONINE KINASE 2 349 - -
Tpr3g3227 355 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Tpr3g3227 355 MobiDBLite consensus disorder prediction 340 355 - -
Tpr3g3227 355 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Tpr3g3227 355 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3227 355 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Tpr3g3227 355 Coils Coil 315 342 - -
Tpr3g3227 355 MobiDBLite consensus disorder prediction 306 355 - -
Tpr3g3227 355 SUPERFAMILY Protein kinase-like (PK-like) 1 295 IPR011009 -
Tpr3g3227 355 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3227 Tpr-Chr3 35434006 35437860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3227 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 41.912 1.60e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr3g3227 Pkinase 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3227 K14498 - gmx:547968 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3227 3 35434006 35437860 Tpr3g3227 3 35434006 35437860 ECH
Tpr3g0756 3 7232099 7235091 Tpr3g3227 3 35434006 35437860 PCT