LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g3225	ATGGTAAAATTTGATGAATCTCTAGATGTTGATTCTAATGAAGTTAGTTCAACTGATAGTCATACATCTGATGATGAGAATTCCAGCTATTCGGCATCCAGTGGGCATGATAGGTCAGATGATGGCGATGATCATGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGGATTTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCACCGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAGGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAGATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGCAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACTAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATAA	906	0.3863	MVKFDESLDVDSNEVSSTDSHTSDDENSSYSASSGHDRSDDGDDHGERAVRINSMTADEIRGMDFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNK*	302

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g3225	301	MobiDBLite	consensus disorder prediction	11	35	-	-
	Tpr3g3225	301	PANTHER	OS02G0262500 PROTEIN	59	301	-	-
	Tpr3g3225	301	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	59	301	IPR031052	GO:0006355
	Tpr3g3225	301	MobiDBLite	consensus disorder prediction	1	45	-	-
	Tpr3g3225	301	Pfam	FAR1 DNA-binding domain	73	167	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g3225	Tpr-Chr3	35417127	35418122	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Tpr3g3225		FAR1	2.3e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g3225	-		-	ccaj:109792835	319.316