Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3206 ATGGCTGACGTCAACCGCTCCAACAAACCTGAGTGGCTTCAACAGTACGATCTCATCGGTAAGATCGGTGAAGGAACCTACGGTCTCGTTTTCCTTGCTCGGATCAAATCCGCCACAAACCGCGGCAAATCCATCGCCATCAAGAAATTCAAACAATCTAAAGACGGCGATGGCGTTTCCCCCACCGCCATCCGTGAAATCATGTTGCTGAGAGAGATAACTCATGAAAATGTTGTGAAGCTTGTGAATGTTCACATCAATCATGCGGACATGTCTCTGTATTTGGCCTTTGATTATGCTGAACATGACCTTTATGAAATAATAAGACATCATAGAGACAAGGTCAACCAATCAATTAATCAGTACACTGTTAAGTCGATACTGTGGCAGTTGCTCAATGGGCTGAACTATCTGCACAGCAATTGGATAATACATCGAGATTTGAAGCCATCGAATATATTGGTTATGGGCGATGGGGAGGAACACGGGGTTGTTAAAGTTGCTGACTTTGGGCTTGCAAGGATATATCAAGCCCCTCTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTATCGTGCTCCTGAGTTGCTTCTTGGAGCAAAACATTATACCAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGTGCAGAAGTCAAAGCTACACCAAATCCTTTTCAGCTTGATCAGCTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCACATCTTCACCATTGGCAACATGATACGCAACAAATACAAGGACACAAATATGACAATGCCAATCTCTATAGTGTTGTACACCTATCTCCAAAAAGTCCTGCATATGACCTATTGTCAAAGATGCTTGAATATGATCCTCGAAGGCGTATAACAGCAGCACAGGCTATGGAGCATGAGTATTTCAAAATGGAACCACAGCCTGGGCGGAATGCACTTGTACCATGCCAACCTGGAGAGGCTTTTGTGAATTATCCCACACGTCCAGTGGACACAACTACAGATTTTGAAGGGACAACCAACATGCAGCAATCACAACCGGTTTCTTCTGGAGCTGCTATTGCTGGAAACATGCCTGGTGGTCATGTATCAAATAGATCTGTCCCTCGACCAATGAATGTTGGCATGCAAAGAATGCATCAGCTGCAAGCATATAATCTCACATCGCAGGCAGGGATGGGTAGTGGAATTAATCCTGCTGGCATCCCAATGCAACGAGGTGTTCCACAACAGGCCCATCAACAGCAACAGTTGAGGAGGAAAGACCAAATGGGAATGCCAGGATACCCTCCACAGCAGAAATCAAGACGTATGTAA 1389 0.4464 MADVNRSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNQSINQYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGDGEEHGVVKVADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLAHLHHWQHDTQQIQGHKYDNANLYSVVHLSPKSPAYDLLSKMLEYDPRRRITAAQAMEHEYFKMEPQPGRNALVPCQPGEAFVNYPTRPVDTTTDFEGTTNMQQSQPVSSGAAIAGNMPGGHVSNRSVPRPMNVGMQRMHQLQAYNLTSQAGMGSGINPAGIPMQRGVPQQAHQQQQLRRKDQMGMPGYPPQQKSRRM* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3206 462 SUPERFAMILY Protein kinase-like (PK-like) 11 328 IPR011009 -
Tpr3g3206 462 Pfam Protein kinase domain 16 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3206 462 PANTHER CYCLIN-DEPENDENT KINASE E-1 5 461 - -
Tpr3g3206 462 ProSiteProfiles Protein kinase domain profile. 16 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3206 462 CDD STKc_CDK8_like 15 326 - -
Tpr3g3206 462 SMART serkin_6 16 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3206 462 MobiDBLite consensus disorder prediction 418 462 - -
Tpr3g3206 462 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Tpr3g3206 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Tpr3g3206 462 PANTHER CELL DIVISION PROTEIN KINASE 5 461 - -
Tpr3g3206 462 Gene3D Phosphorylase Kinase; domain 1 2 98 - -
Tpr3g3206 462 Gene3D Transferase(Phosphotransferase) domain 1 99 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3206 Tpr-Chr3 35217040 35229338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3206 9 462 Core Cell Cycle Gene Families AT5G63610 75.974 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Tpr3g3206 Pkinase 4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3206 K02208 - gmx:100813433 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3206 3 35217040 35229338 Tpr3g3206 3 35217040 35229338 ECH