Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3185 ATGTCTGGAACTACCGGAAAGGGGAAGAAGAGGGACGAACACGACACCACTTCCGACGGCGACGCTGAAACTCACGCGCCTCCCAAGAAGTCTATCAAGAAGGACTCCGACAAGGATAGTCCTGGTGACATCTTCGTAGCAGAGCTTTCCAAGAACAGGAAGGTTTCTGTGAGGATCTGGCAGGGTAAGGTTTGGGTAGACATTCGTGAATTTTACGATAAAGATGGCAAGCAATGTCCTGGCAAAAAAGGTATCTCATTGAGCAAGGATCAGTGGATTGTGCTTCGTGATCACATTTCAGAAATTGACAAGGCAGTCCAAGATTGA 327 0.4771 MSGTTGKGKKRDEHDTTSDGDAETHAPPKKSIKKDSDKDSPGDIFVAELSKNRKVSVRIWQGKVWVDIREFYDKDGKQCPGKKGISLSKDQWIVLRDHISEIDKAVQD* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3185 108 Pfam Transcriptional Coactivator p15 (PC4) 48 98 IPR003173 GO:0003677|GO:0006355
Tpr3g3185 108 MobiDBLite consensus disorder prediction 1 41 - -
Tpr3g3185 108 PANTHER BNAC09G47220D PROTEIN 7 108 - -
Tpr3g3185 108 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 7 108 IPR045125 GO:0003713|GO:0060261
Tpr3g3185 108 SUPERFAMILY ssDNA-binding transcriptional regulator domain 46 107 IPR009044 GO:0003677|GO:0006355
Tpr3g3185 108 Gene3D Transcriptional Coactivator Pc4; Chain A 46 108 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3185 Tpr-Chr3 35060107 35062483 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Tpr3g3185 PC4 9.4e-22 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3185 K25815 - thj:104818417 132.109