Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3176 ATGAAGTTAATCGGCGACGGAGGCACTGGCCGGAAAGTTCTAGTCGGAGTTAAATTAGATCCCCGCAGCCGTGAATTACTCACGTGGGCACTCGTTAAGGTCGCCGAACCCGGCGACCTTGTTATCGCGCTTCACGTTCTCGATACAGTCACTGAGGGAACATCGTCGTTGCTATCTCTGGTGAAAACTTTTGATTCAGTTCTCGCCGTATACGAAGGCTTCTGCAATTTAAAGCAGGTTGATCTTAGGTTGAAAGTGTGTAGAGGTGATTCGGTTAGGAAGCTTCTAGTACAAGAGGCGAAAGCGTTTGGAGTTTCAACGGTGATTTTAGGAACTTCCAAATCTCATCATACAATTCGTTCGTCGTCGTGGGTTGCTAAGTATTGTGCGAAGAAATTGCATAAATGTGTTTCTGTTTTTGCTGTTGATAATGGCAAAATTGCTTTCCAAAGAGAAGCTAGTGGTCAAGAAAAATTACCTGAAGGACCACATTTATCATCGAAATCGTTGGTGATTTTTACTAATAAAAGTGTGAAGAATTGTGGAAGTTGTGCTCTACGAGAGATATCTGAAACTGAAGTTGATCAAGGGGAGTTACTTGATCATGATTGTGAAAAGGAAAACTCACTTGCTTTGGTACCGTTTCAAAAACTTGATGATCATGATTCCGTGGTGGGTAATTCCAAACAGTCAAAACCTGGTTGGTCGCTTATTCGCCATGTATTTCAGCACAAAAAGCATACTCCCAAGTCTTCGCCGAAAAGTACATTTGTTTTTCAACGGGCATTACGACATTCCAGTACTAGTACTCAATCTTCAGCTGTAGTATATCCAGATCATAAACAGATTAATATTGATAAAGTTGATGATTCTCCCCTGGATGGGGAGAGTGGTGCCATTGTGCCATTTGGATCTGCCATTACCTTGCCTCCTCCCACCCTTTGTAGTGACACCGGTAACCTTCCTGAAGAATTGTTGGTCTTACGAGAGAAGTATTCGTCTTCTTGTAGATTGTATAGTTTGCAGGAACTTGTAGCCGCAACTGTAAACTTCTCATCCAAAAATTTGGTTGGCAAAGGTGGTAGTAGTGATGTTTACAGAGGATGTCTTCCTGATGGCAAGGAATTGGCTGTGAAAATTTTGAAGCCGTCAGAAAATGTCCTAAAAGAGTTTGCTCAGGAAGTTGAGATTGTTACAACTTTGCATCACAAGAACATAATATCTCTATCTGGTTTTTGTTTAGAGGGAAACCATTTATTACTGGTCTATGATTTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCACGGTAATAAAAAAGACTATAATTCATTTGGATGGCAAGAGAGGTACCGGGTGGCCGTGGGTGTAGCCGAGGCCTTGGATTATCTGCATAACGGCTGTGCACGAGCTGTAATCCATAGAGATGTCAAATCTTCTAATATCCTTCTTTCAGACGATTTTGAGGCTCAGCTCTCAGATTTTGGACTGGCTAGTTGGGTTTCTTCTTCCCATATTATTTGTACTGATGTGGCTGGAACTTTTGGGTACCTAGCTCCTGAGTATTTTATGCACGGTAGAGTAACCGACAAAATTGATGTTTATGCTTTTGGTGTTGTACTCCTTGAGCTTCTATCCAATAGGAAGCCCATTAACAATGAATGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCTACATCAATCTTGAAAAGTGGGAAGATTTCCCAGTTGCTTGACCCAAGCCTTGGCAGTGAATACAACGATTGCGAGATCAAGAGAATGGTTTTGGCTGCTACTCTATGTATTAGACGAGTTCCTAGACTGCGACCTCAAATCAGCCTTATACTGAAACTTCTTAATGGCGACGAAGAAGTAACACGATGGGCAGAACAAGAAGTTTGTGCACCAGAGACGCATGATGGATTTGATGAAGAACCAGTTCCAACAAATATCCAGTCCCATCTTAACCTTGCGTTGCAGGACTTGGATGATGATGCAGTTTCTATCAGTAGCACTGAGCAGAGTGTTTCATTGGAGGACTATTTGCAAGGAAGATGGAGTCGCTCTTCAAGTTTTGACTAA 2085 0.4221 MKLIGDGGTGRKVLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDTVTEGTSSLLSLVKTFDSVLAVYEGFCNLKQVDLRLKVCRGDSVRKLLVQEAKAFGVSTVILGTSKSHHTIRSSSWVAKYCAKKLHKCVSVFAVDNGKIAFQREASGQEKLPEGPHLSSKSLVIFTNKSVKNCGSCALREISETEVDQGELLDHDCEKENSLALVPFQKLDDHDSVVGNSKQSKPGWSLIRHVFQHKKHTPKSSPKSTFVFQRALRHSSTSTQSSAVVYPDHKQINIDKVDDSPLDGESGAIVPFGSAITLPPPTLCSDTGNLPEELLVLREKYSSSCRLYSLQELVAATVNFSSKNLVGKGGSSDVYRGCLPDGKELAVKILKPSENVLKEFAQEVEIVTTLHHKNIISLSGFCLEGNHLLLVYDFLSRGSLEENLHGNKKDYNSFGWQERYRVAVGVAEALDYLHNGCARAVIHRDVKSSNILLSDDFEAQLSDFGLASWVSSSHIICTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATSILKSGKISQLLDPSLGSEYNDCEIKRMVLAATLCIRRVPRLRPQISLILKLLNGDEEVTRWAEQEVCAPETHDGFDEEPVPTNIQSHLNLALQDLDDDAVSISSTEQSVSLEDYLQGRWSRSSSFD* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3176 694 SMART serkin_6 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3176 694 SUPERFAMILY Protein kinase-like (PK-like) 332 634 IPR011009 -
Tpr3g3176 694 CDD USP_Like 12 137 - -
Tpr3g3176 694 Gene3D Phosphorylase Kinase; domain 1 322 425 - -
Tpr3g3176 694 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 213 - -
Tpr3g3176 694 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 221 688 - -
Tpr3g3176 694 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 116 - -
Tpr3g3176 694 ProSiteProfiles Protein kinase domain profile. 351 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3176 694 Gene3D Transferase(Phosphotransferase) domain 1 426 636 - -
Tpr3g3176 694 PANTHER OS01G0253100 PROTEIN 221 688 IPR045271 GO:0004714|GO:0006468
Tpr3g3176 694 PANTHER OS01G0253100 PROTEIN 7 213 IPR045271 GO:0004714|GO:0006468
Tpr3g3176 694 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Tpr3g3176 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Tpr3g3176 694 Pfam Universal stress protein family 11 136 IPR006016 -
Tpr3g3176 694 Gene3D HUPs 10 143 IPR014729 -
Tpr3g3176 694 Pfam Protein kinase domain 352 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3176 Tpr-Chr3 34978960 34982820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3176 339 627 Trihelix Transcription Factor Family AT5G38560 43.289 2.17e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr3g3176 Pkinase 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3176 - - gmx:100815722 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3176 3 34978960 34982820 Tpr3g3176 3 34978960 34982820 ECH